Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2668 |
Symbol | |
ID | 6147030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2737792 |
End bp | 2738802 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617539 |
Product | cytoskeletal protein RodZ |
Protein accession | YP_001744704 |
Protein GI | 170683159 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.248516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTG AAGCCACGCA CGACCAAAAT GAAGCACTTA CTACCGGCGC TCGCCTGCGT AATGCTCGCG AACAACTAGG ACTTAGTCAG CAGGCCGTTG CTGAGCGACT TTGCCTGAAG GTTTCCACGG TACGCGACAT TGAAGAAGAT AAGGCACCTG CCGATCTTGC TTCAACATTC CTGCGCGGAT ATATCCGCTC TTATGCGCGT CTGGTACATA TTCCAGAAGA AGAACTGCTA CCGGGGCTGG AAAAACAGGC TCCACTACGA GCTGCAAAAG TTGCGCCGAT GCAGAGTTTT TCCCTCGGTA AACGCCGCAA AAAACGTGAC GGCTGGCTGA TGACCTTCAC CTGGCTGGTG TTGTTTGTGG TTATTGGCCT GAGCGGTGCC TGGTGGTGGC AAGACCACAA AGCTCAGCAG GAAGAGATCA CCACTATGGC CGATCAATCT TCTGCGGAAC TGAATAATAA TCAAAGCCAG AGTGTACCGT TAGATACGTC GACAACCACA GATCAGGCTA TGGCGACCAC GCCGACATCA CCTGTGGATA CCACCGCAAC TAACACGCAA ACACCTGCCG CGACGACGGC TCCATCGCCA ACCGTCGATT CACAACAGAA TGCGGTTGTT CCACCTTCGC AGGCAAATGT TGATACCGCT GCGACTCCGG CACCAGCGGC AACAACAATG CCAGATGGTG CTGCGCCGTT GCCAACCGAT CAGGCAGGCG TGACTACGCC GGCGGCTGAT CCGAATGCGC TGGTGATGAA CTTTACTGCC GATTGCTGGC TGGAGGTTAC TGATGCTACC GGTAAAAAAC TGTTTAGCGG TATGCAGCGT AAAGACGGTA ATTTGAACTT AACCGGCCAG GCACCGTACA AACTGAAAAT TGGTGCGCCA GCCGCAGTAC AGATCCAGTA TCAAGGGAAA CCTGTCGATC TGAGTCGTTT TATCAGAACT AACCAGGTTG CGCGTCTGAC CCTCAATGCC GAACAATCAC CGGCGCAGTA A
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Protein sequence | MNTEATHDQN EALTTGARLR NAREQLGLSQ QAVAERLCLK VSTVRDIEED KAPADLASTF LRGYIRSYAR LVHIPEEELL PGLEKQAPLR AAKVAPMQSF SLGKRRKKRD GWLMTFTWLV LFVVIGLSGA WWWQDHKAQQ EEITTMADQS SAELNNNQSQ SVPLDTSTTT DQAMATTPTS PVDTTATNTQ TPAATTAPSP TVDSQQNAVV PPSQANVDTA ATPAPAATTM PDGAAPLPTD QAGVTTPAAD PNALVMNFTA DCWLEVTDAT GKKLFSGMQR KDGNLNLTGQ APYKLKIGAP AAVQIQYQGK PVDLSRFIRT NQVARLTLNA EQSPAQ
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