Gene EcSMS35_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2660 
Symbol 
ID6144501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2728135 
End bp2729127 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content52% 
IMG OID641617531 
Productputative adhesin 
Protein accessionYP_001744696 
Protein GI170680922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.468628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC ATATGAAACG TGGCCTGACA AGAGTCGCGC TGGCACTGAT GCTGGCTGGA 
TACTGTGCCG TGCCAGCCGC TATGGCGGAA GATGCCGCCT GGGTAGCCAG TGGGACGACC
GCTGAATTCG AAGGGACCAT ACCCTGGCTT TATCGCGAGG GTGGGAATGC CACGATTAAC
TCGGATGATG CGGATCACAT CAAAGTAACG TCTGATGGTA AAGGTACTCG TCCTTCAGGT
AGCGAGACGG ATAAACGCCT TTACTCAGGA GATACCATCA CGTTGGGGTG GGATATCGGC
GATACCGAAG GGGATATCGA CGATGGTCCA GACGGTATTG ATGCGAAAAC GACAGCCACT
ATCAAATGGT ACAGTTACAG CGATAATGCG GGTGGCGGTA AAACGGAGCT GACCGCAGCG
GCAGGCAAGA CGAGTTATAA ACTCACTGAT GACGAACGTG GGCGTTATAT CGGTGTTGAA
ATCCAGCCCA TCACCCAGAC CGGTAATCCT TTCCAGGGAA CATCGCTGAC TCTGCTGGAT
ATTTCAACGG CCAGCGGTGG CGGCAGCGAT ACGGATAATG TTGATCCTGG CCCGGTTGTG
AACCAGAACC TGAAAGTTGC CATCTTCGAG AAAGGCACCA GTACCAACCT TATCGGTGGT
AATACAGCCA TTGCGCTTAA CAAAACGTAT GTGGCCAAAC TGTACTCGGA TGAAAACCAG
AATGGTAAGT ACGATGCGGG TACGGATGTG GACGTTACCG CTAACTACGA CTTTGCGTGG
GTCTTTAACG GTAACAGTAA ACAACTTGCG GCGGCGGGCG GTATTGCCAA CGCCAGCTTC
GATAACAATG ACATTGTTAT TCCGCAAACT AACGAACAAG CAAGAACCAG CCTTAACGGT
AGTGACCGTA ATGGTAAGAC CGGCCTTGCA ATCCCGGCAA ACGGCGACGG CGTTCAGGGC
TATACGCTGT CTATCATTTA CAAACACCAC TAA
 
Protein sequence
MKPHMKRGLT RVALALMLAG YCAVPAAMAE DAAWVASGTT AEFEGTIPWL YREGGNATIN 
SDDADHIKVT SDGKGTRPSG SETDKRLYSG DTITLGWDIG DTEGDIDDGP DGIDAKTTAT
IKWYSYSDNA GGGKTELTAA AGKTSYKLTD DERGRYIGVE IQPITQTGNP FQGTSLTLLD
ISTASGGGSD TDNVDPGPVV NQNLKVAIFE KGTSTNLIGG NTAIALNKTY VAKLYSDENQ
NGKYDAGTDV DVTANYDFAW VFNGNSKQLA AAGGIANASF DNNDIVIPQT NEQARTSLNG
SDRNGKTGLA IPANGDGVQG YTLSIIYKHH