Gene EcSMS35_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2640 
Symbol 
ID6147344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2699147 
End bp2700208 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID641617511 
ProductPerM family permease 
Protein accessionYP_001744676 
Protein GI170684284 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAA TGTTGATGCA ATGGTATCGC CGCCGTTTTA GCGACCCGGA AGCGATTGCC 
TTGCTGGTTA TTTTAGTTGC CGGATTTGGC ATTATCTTTT TCTTTAGTGG CCTGCTTGCT
CCGTTGCTGG TGGCTATTGT GCTGGCCTAT TTGCTGGAAT GGCCAACCGT GCGCCTGCAA
TCTATTGGCT GCTCCCGCCG CTGGGCGACG TCGATTGTAT TGGTGGTTTT CGTCGGTATA
TTGCTACTGA TGGCGTTCGT GGTGCTGCCT ATCGCCTGGC AACAGGGCAT CTACTTAATC
CGCGATATGC CGGGGATGCT CAATAAGCTT TCTGACTTTG CCGCCACGTT GCCGCGCCGC
TATCCGGCGT TAATGGACGC GGGCATTATT GATGCAATGG CCGAAAATAT GCGCAGTCGG
ATGCTGACCA TGGGCGATTC GGTGGTGAAA ATTTCCCTCG CCTCGCTGGT CGGTTTGCTG
ACCATAGCCG TCTATCTGGT GCTGGTGCCA TTGATGGTCT TCTTCCTGCT GAAAGACAAA
GAGCAGATGC TGAACGCCGT TCGTCGGGTG CTGCCGCGTA ACCGTGGGCT GGCAGGACAG
GTGTGGAAGG AGATGAATCA ACAAATCACC AACTATATCC GCGGCAAAGT GCTGGAGATG
ATCGTGGTGG GGATCGCCAC CTGGCTGGGG TTCTTACTCT TCGGGCTGAA CTATTCGCTG
CTGCTGGCGG TGCTGGTCGG CTTCTCGGTA CTTATTCCGT ACATTGGTGC ATTTGTGGTG
ACCATTCCGG TGGTTGGCGT GGCGCTATTC CAGTTTGGTG CTGGCACGGA ATTCTGGAGC
TGCTTCGCGG TGTATCTGAT TATTCAGGCG CTGGACGGCA ACCTGTTAGT ACCTGTGTTG
TTCTCCGAAG CGGTTAACCT GCATCCGCTG GTCATTATTT TATCAGTAGT GATCTTCGGT
GGTTTGTGGG GATTCTGGGG CGTATTCTTC GCCATTCCAT TGGCGACGCT GATCAAAGCC
GTGATTCACG CCTGGCCCGA TGGGCAAATC GCGCAAGAAT AA
 
Protein sequence
MLEMLMQWYR RRFSDPEAIA LLVILVAGFG IIFFFSGLLA PLLVAIVLAY LLEWPTVRLQ 
SIGCSRRWAT SIVLVVFVGI LLLMAFVVLP IAWQQGIYLI RDMPGMLNKL SDFAATLPRR
YPALMDAGII DAMAENMRSR MLTMGDSVVK ISLASLVGLL TIAVYLVLVP LMVFFLLKDK
EQMLNAVRRV LPRNRGLAGQ VWKEMNQQIT NYIRGKVLEM IVVGIATWLG FLLFGLNYSL
LLAVLVGFSV LIPYIGAFVV TIPVVGVALF QFGAGTEFWS CFAVYLIIQA LDGNLLVPVL
FSEAVNLHPL VIILSVVIFG GLWGFWGVFF AIPLATLIKA VIHAWPDGQI AQE