Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2574 |
Symbol | pdxK |
ID | 6146587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2628814 |
End bp | 2629665 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617445 |
Product | pyridoxal kinase |
Protein accession | YP_001744610 |
Protein GI | 170682925 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.303723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTT TGTTGTTGTT TAACGATAAG AGCAGGGCAC TGCAGGCGGA TATCGTTGCC GTGCAGTCGC AGGTAGTGTA CGGCAGCGTA GGCAACAGCA TTGCGGTGCC TGCTATCAAA CAGAACGGCC TGAATGTCTT TGCCGTGCCG ACGGTATTGC TGAGCAATAC GCCGCATTAT GACACTTTCT ACGGTGGTGC GATTCCGGAT GAATGGTTTA GCGGTTATTT GCGTGCGCTT CAGGAGCGTG ATGCGCTGCG CCAACTTCGT GCTGTAACCA CGGGCTATAT GGGAACGGCA TCGCAAATCA AAATCCTTGC CGAGTGGCTG ACTGCGCTAC GCAAAGACCA TTCTGACTTA TTGATTATGG TCGATCCGGT GATCGGCGAT ATTGATAGCG GAATTTATGT CAAACCTGAC CTTCCCGAAG CGTATCGACA ATATTTACTG CCGCTGGCGC AGGGAATTAC CCCCAATATC TTTGAGCTGG AAATCCTGAC CGGTAAAAAT TGCCGCGATC TCGACAGTGC CATTGCTGCC GCAAAAAGTC TGCTTTCAGA CACATTAAAA TGGGTGGTGA TTACCAGCGC CTCCGGTAAT GAAGAAAATC AGGAGATGCA GGTGGTGGTG GTCAGTGCCG ACAGCGTGAA TGTCATTTCC CATTCACGGG TTAAAACTGA CCTGAAAGGG ACTGGCGACC TGTTTTGTGC TCAGCTTATC AGTGGTTTGC TGAAAGGGGA GGCGTTAACC GATGCGGTGC ACCGCGCGGG GTTGCGCGTA CTGGAAGTGA TGCGCTATAC CCAGCAGCAT GAGAGCGATG AATTGATTTT GCCGCCGCTG GCGGAAGCAT AA
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Protein sequence | MSSLLLFNDK SRALQADIVA VQSQVVYGSV GNSIAVPAIK QNGLNVFAVP TVLLSNTPHY DTFYGGAIPD EWFSGYLRAL QERDALRQLR AVTTGYMGTA SQIKILAEWL TALRKDHSDL LIMVDPVIGD IDSGIYVKPD LPEAYRQYLL PLAQGITPNI FELEILTGKN CRDLDSAIAA AKSLLSDTLK WVVITSASGN EENQEMQVVV VSADSVNVIS HSRVKTDLKG TGDLFCAQLI SGLLKGEALT DAVHRAGLRV LEVMRYTQQH ESDELILPPL AEA
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