Gene EcSMS35_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2473 
Symbol 
ID6142761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2520947 
End bp2521606 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID641617345 
Producthypothetical protein 
Protein accessionYP_001744517 
Protein GI170684287 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA TTTATTTCCT CATCGATTTT ATCCTGCACA TTGACGTGCA TCTGGCAGAA 
CTGGTCGCGG AGTATGGCGT CTGGGTTTAT GCCATTTTGT TCTTAATTTT GTTCTGTGAA
ACCGGTCTGG TGGTAACGCC GTTTTTACCG GGTGATTCAT TGCTGTTTGT TGCCGGTGCG
TTGGCATCAC TGGAAACCAA CGATCTCAAC GTCCATATGA TGGTGGTGCT GATGCTGATC
GCCGCGATTG TGGGTGACGC GGTGAACTAC ACCATTGGAC GGTTATTTGG TGACAAACTG
TTCAGTAATC CGGATTCGAA AATCTTTCGT CGCAGTTATC TTGATAAGAC TCATCAGTTT
TATGAGAAAC ATGGCGGCAA AACGATTATT CTCGCCCGTT TTGTGCCGAT CGTCAGAACG
TTCGCGCCGT TCGTTGCGGG AATGGGCCAC ATGTCGTATC GTCATTTCGC CGCTTTTAAC
GTCATCGGCG CGTTGCTATG GGTACTGATT TTTACCTACG CGGGTTATTT CTTCGGAACG
CTCCCCTTCA TTCAGAGCAA CCTTAAACTG ATGATTGTTG GCATTATTTT TGTTTCAATA
TTGCCAGGTG TTTTCGAATT TATTCGCCAC AAACGCGCTG CGGCACGCGC CGCAAAATAA
 
Protein sequence
MDLIYFLIDF ILHIDVHLAE LVAEYGVWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA 
LASLETNDLN VHMMVVLMLI AAIVGDAVNY TIGRLFGDKL FSNPDSKIFR RSYLDKTHQF
YEKHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAFN VIGALLWVLI FTYAGYFFGT
LPFIQSNLKL MIVGIIFVSI LPGVFEFIRH KRAAARAAK