Gene EcSMS35_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2470 
Symbol 
ID6145797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2517887 
End bp2518549 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID641617342 
Producthypothetical protein 
Protein accessionYP_001744514 
Protein GI170681548 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAGTA AGTTTCAGAA TCGGTTAGTG GGCACGATCG TGCTGGTGGC GCTGGGGGTG 
ATTGTACTTC CAGGGCTGCT GGACGGGCAG AAAAAACATT ATCAGGATGA GTTCGCGGCT
ATCCCGCTGG TGCCGAAAGC GGGCGATCGC GATGAGCCTG ATATGATGCC AGCAGCCACT
CAGGCGTTGC CGACGCAGCC GCCGGAAGGC GCAGCGGAAG AGGTGCGGGC AGGTGATGCC
GCAGCACCGT CGCTCGATCC GGCCACTATT GCAGCCAATA ACACCGAGTT TGAACCGGAA
CCTGCACCGG TCGTCCCACC GAAGCCGAAA CCGGTAGAGC CGCCTAAGCC AAAGGTTGAA
GCACCACCTG CGCCGAAGCC AGAACCGAAG CCGGTCGTGG AAGAAAAAGC AGCGCCAACG
GGTAAAGCTT ATGTTGTGCA ACTGGGCGCG CTGAAAAATG CCGATAAAGT GAATGAGATT
GTCGGTAAGC TGCGCGGTGC CGGTTATCGG GTTTATACGT CGCCATCCAC GCCAGTGCAG
GGTAAAATTA CCCGTATTCT GGTTGGGCCG GATGCCTCGA AAGATAAGCT GAAAGGTTCG
CTGGGTGAGT TGAAGCAACT TTCTGGCTTA AGCGGCGTGG TAATGGGTTA TACACCGAAT
TAA
 
Protein sequence
MASKFQNRLV GTIVLVALGV IVLPGLLDGQ KKHYQDEFAA IPLVPKAGDR DEPDMMPAAT 
QALPTQPPEG AAEEVRAGDA AAPSLDPATI AANNTEFEPE PAPVVPPKPK PVEPPKPKVE
APPAPKPEPK PVVEEKAAPT GKAYVVQLGA LKNADKVNEI VGKLRGAGYR VYTSPSTPVQ
GKITRILVGP DASKDKLKGS LGELKQLSGL SGVVMGYTPN