Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2462 |
Symbol | hisP |
ID | 6146125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2510624 |
End bp | 2511397 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617334 |
Product | histidine/lysine/arginine/ornithine transporter subunit |
Protein accession | YP_001744506 |
Protein GI | 170682608 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.460847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGA ATAAATTAAA CGTTATCGAT TTGCACAAAC GCTACGGCGA ACACGAAGTG CTGAAAGGGG TTTCACTGCA AGCGAATGCC GGAGATGTAA TTAGCATCAT CGGATCGTCG GGATCGGGGA AAAGTACCTT TCTGCGCTGC ATTAACTTCC TCGAAAAACC GAGCGAAGGA TCGATCGTGG TCAATGGCCA GACGATCAAT CTGGTGCGCG ACAAAGATGG TCAACTCAAA GTCGCCGATA AAAATCAGCT GCGCTTACTG CGCACACGCC TGACGATGGT ATTCCAGCAC TTCAATCTCT GGAGCCATAT GACGGTGCTG GAAAACGTCA TGGAAGCGCC GATTCAGGTG TTGGGCCTGA GCAAGCAGGA AGCGCGCGAG CGGGCGGTGA AGTATCTGGC GAAAGTCGGG ATAGACGAAC GTGCGCAGGG GAAATATCCG GTGCATCTTT CCGGCGGTCA GCAACAGCGT GTTTCCATCG CAAGGGCGCT GGCAATGGAA CCGGAAGTTT TACTGTTTGA TGAACCTACC TCGGCGCTCG ATCCTGAACT GGTAGGCGAA GTGTTGCGTA TTATGCAGCA ACTGGCAGAA GAGGGGAAAA CCATGGTGGT GGTGACCCAC GAAATGGGCT TTGCTCGCCA TGTTTCTACT CACGTCATTT TTCTCCATCA GGGGAAAATA GAGGAAGAAG GCGCGCCGGA GCAGTTATTT GGCAACCCGC AAAGCCCTCG TCTGCAACAG TTCCTTAAGG GATCGCTGAA ATAA
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Protein sequence | MSENKLNVID LHKRYGEHEV LKGVSLQANA GDVISIIGSS GSGKSTFLRC INFLEKPSEG SIVVNGQTIN LVRDKDGQLK VADKNQLRLL RTRLTMVFQH FNLWSHMTVL ENVMEAPIQV LGLSKQEARE RAVKYLAKVG IDERAQGKYP VHLSGGQQQR VSIARALAME PEVLLFDEPT SALDPELVGE VLRIMQQLAE EGKTMVVVTH EMGFARHVST HVIFLHQGKI EEEGAPEQLF GNPQSPRLQQ FLKGSLK
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