Gene EcSMS35_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2462 
SymbolhisP 
ID6146125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2510624 
End bp2511397 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content52% 
IMG OID641617334 
Producthistidine/lysine/arginine/ornithine transporter subunit 
Protein accessionYP_001744506 
Protein GI170682608 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.460847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA ATAAATTAAA CGTTATCGAT TTGCACAAAC GCTACGGCGA ACACGAAGTG 
CTGAAAGGGG TTTCACTGCA AGCGAATGCC GGAGATGTAA TTAGCATCAT CGGATCGTCG
GGATCGGGGA AAAGTACCTT TCTGCGCTGC ATTAACTTCC TCGAAAAACC GAGCGAAGGA
TCGATCGTGG TCAATGGCCA GACGATCAAT CTGGTGCGCG ACAAAGATGG TCAACTCAAA
GTCGCCGATA AAAATCAGCT GCGCTTACTG CGCACACGCC TGACGATGGT ATTCCAGCAC
TTCAATCTCT GGAGCCATAT GACGGTGCTG GAAAACGTCA TGGAAGCGCC GATTCAGGTG
TTGGGCCTGA GCAAGCAGGA AGCGCGCGAG CGGGCGGTGA AGTATCTGGC GAAAGTCGGG
ATAGACGAAC GTGCGCAGGG GAAATATCCG GTGCATCTTT CCGGCGGTCA GCAACAGCGT
GTTTCCATCG CAAGGGCGCT GGCAATGGAA CCGGAAGTTT TACTGTTTGA TGAACCTACC
TCGGCGCTCG ATCCTGAACT GGTAGGCGAA GTGTTGCGTA TTATGCAGCA ACTGGCAGAA
GAGGGGAAAA CCATGGTGGT GGTGACCCAC GAAATGGGCT TTGCTCGCCA TGTTTCTACT
CACGTCATTT TTCTCCATCA GGGGAAAATA GAGGAAGAAG GCGCGCCGGA GCAGTTATTT
GGCAACCCGC AAAGCCCTCG TCTGCAACAG TTCCTTAAGG GATCGCTGAA ATAA
 
Protein sequence
MSENKLNVID LHKRYGEHEV LKGVSLQANA GDVISIIGSS GSGKSTFLRC INFLEKPSEG 
SIVVNGQTIN LVRDKDGQLK VADKNQLRLL RTRLTMVFQH FNLWSHMTVL ENVMEAPIQV
LGLSKQEARE RAVKYLAKVG IDERAQGKYP VHLSGGQQQR VSIARALAME PEVLLFDEPT
SALDPELVGE VLRIMQQLAE EGKTMVVVTH EMGFARHVST HVIFLHQGKI EEEGAPEQLF
GNPQSPRLQQ FLKGSLK