Gene EcSMS35_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2461 
Symbol 
ID6142737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2509525 
End bp2510427 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content46% 
IMG OID641617333 
Producthypothetical protein 
Protein accessionYP_001744505 
Protein GI170681929 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.171355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAT CGACAACTTC CACGCCGCAT GATGCGGTAT TTAAATCTTT TTTACGCCAT 
CCAGACACCG CCCGGGATTT TATTGATATT CATCTCCCCG CGCCGCTGCG CAAACTGTGT
GATTTAACGA CGCTTAAACT GGAACCAAAC AGTTTTATTG ATGAAGACCT GCGGCAATAT
TATTCCGACC TCTTGTGGTC TGTGAAAACG CAGGAGGGAG CGGGTTATAT TTATGTGGTG
ATAGAGCACC AAAGTAAGCC GGAAGAATTA ATGGCTTTTC GCATGATGCG CTATTCCATT
GCGGCGATGC AAAACCATCT TGATGCAGGC TATAAAGAGC TTCCATTGGT GATCCCGATG
CTGTTTTATC ATGGTTGCAG AAGTCCTTAT CCTTATTCAC TCTGCTGGCT TGATGAATTT
GCCGAGCCTG CTATAGCCCG CAAAATATAT TCATCAGCTT TTCCGCTGGT GGATATTACC
GTGGTGCCGG ATGACGAGAT TATGCAACAT CGCAAAATGG CGCTGTTGGA GTTAATTCAG
AAACATATTC GTCAGCGCGA TCTGTTGGGA TTAGTCGACC AAATTGTTTC GCTGCTAGTT
ACAGGAAACA CTAATGACAG GCAGCTAAAA GCCCTGTTTA ATTACGTATT ACAAACGGGA
GATGCCCAGC GTTTCCGTGC ATTTATTGGT GAGATAGCGG AACGCGCACC ACAAGAAAAG
GAGAAACTGA TGACTATTGC TGACAGATTA CGTGAAGAAG GGCGGAATGA TGGATTAATT
CTGGGCAAAC GCGAAGAAGC CCTGCGTATT GCTCAGGAGA TGCTGGAGAG AGGTTTAGAC
AGAGAGTTAG TTATGATGGT GACCCGACTT TCACCAGACG ATCTTATCGC GCAAAGCCAC
TAA
 
Protein sequence
MTISTTSTPH DAVFKSFLRH PDTARDFIDI HLPAPLRKLC DLTTLKLEPN SFIDEDLRQY 
YSDLLWSVKT QEGAGYIYVV IEHQSKPEEL MAFRMMRYSI AAMQNHLDAG YKELPLVIPM
LFYHGCRSPY PYSLCWLDEF AEPAIARKIY SSAFPLVDIT VVPDDEIMQH RKMALLELIQ
KHIRQRDLLG LVDQIVSLLV TGNTNDRQLK ALFNYVLQTG DAQRFRAFIG EIAERAPQEK
EKLMTIADRL REEGRNDGLI LGKREEALRI AQEMLERGLD RELVMMVTRL SPDDLIAQSH