Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2461 |
Symbol | |
ID | 6142737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2509525 |
End bp | 2510427 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641617333 |
Product | hypothetical protein |
Protein accession | YP_001744505 |
Protein GI | 170681929 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.171355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATAT CGACAACTTC CACGCCGCAT GATGCGGTAT TTAAATCTTT TTTACGCCAT CCAGACACCG CCCGGGATTT TATTGATATT CATCTCCCCG CGCCGCTGCG CAAACTGTGT GATTTAACGA CGCTTAAACT GGAACCAAAC AGTTTTATTG ATGAAGACCT GCGGCAATAT TATTCCGACC TCTTGTGGTC TGTGAAAACG CAGGAGGGAG CGGGTTATAT TTATGTGGTG ATAGAGCACC AAAGTAAGCC GGAAGAATTA ATGGCTTTTC GCATGATGCG CTATTCCATT GCGGCGATGC AAAACCATCT TGATGCAGGC TATAAAGAGC TTCCATTGGT GATCCCGATG CTGTTTTATC ATGGTTGCAG AAGTCCTTAT CCTTATTCAC TCTGCTGGCT TGATGAATTT GCCGAGCCTG CTATAGCCCG CAAAATATAT TCATCAGCTT TTCCGCTGGT GGATATTACC GTGGTGCCGG ATGACGAGAT TATGCAACAT CGCAAAATGG CGCTGTTGGA GTTAATTCAG AAACATATTC GTCAGCGCGA TCTGTTGGGA TTAGTCGACC AAATTGTTTC GCTGCTAGTT ACAGGAAACA CTAATGACAG GCAGCTAAAA GCCCTGTTTA ATTACGTATT ACAAACGGGA GATGCCCAGC GTTTCCGTGC ATTTATTGGT GAGATAGCGG AACGCGCACC ACAAGAAAAG GAGAAACTGA TGACTATTGC TGACAGATTA CGTGAAGAAG GGCGGAATGA TGGATTAATT CTGGGCAAAC GCGAAGAAGC CCTGCGTATT GCTCAGGAGA TGCTGGAGAG AGGTTTAGAC AGAGAGTTAG TTATGATGGT GACCCGACTT TCACCAGACG ATCTTATCGC GCAAAGCCAC TAA
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Protein sequence | MTISTTSTPH DAVFKSFLRH PDTARDFIDI HLPAPLRKLC DLTTLKLEPN SFIDEDLRQY YSDLLWSVKT QEGAGYIYVV IEHQSKPEEL MAFRMMRYSI AAMQNHLDAG YKELPLVIPM LFYHGCRSPY PYSLCWLDEF AEPAIARKIY SSAFPLVDIT VVPDDEIMQH RKMALLELIQ KHIRQRDLLG LVDQIVSLLV TGNTNDRQLK ALFNYVLQTG DAQRFRAFIG EIAERAPQEK EKLMTIADRL REEGRNDGLI LGKREEALRI AQEMLERGLD RELVMMVTRL SPDDLIAQSH
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