Gene EcSMS35_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2402 
Symbol 
ID6142680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2450809 
End bp2451591 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content51% 
IMG OID641617275 
ProductIclR family transcriptional regulator 
Protein accessionYP_001744447 
Protein GI170683760 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAT CAAGCAAAGT TCCCGCCCTG ACACGGGCTA TTGATATTCT CAATTTGATT 
GCCCGCATTG GCCCCTGTAG TGCTGCGACG ATCATTGACA CATTGGGGAT CCCTAAAAGC
ACGGCCTATT TGCTGCTTAA TGAACTCAGG CGTCAGCGTT TTCTTAGCCT TGATCACCAG
GAAAATTTTT GTTTGTGGAC CAGGCTGGTG GAGCTTTCCG GTCATGCGTT AAGCAAGATG
GATCTCCGGG AACTGGCTCG ACCGCGTTTG ACGCAACTGA TGGATACCAC CGGGCTGTTA
TGTCACCTGG GGATTATTGA TAACGGCAGC GCTTATTACA TTTTGAAAGT GGAGTCATCA
GCCACTATCA GCGTGCGTTC CCATGAAGGA AAAAGCCTTT CGCTTTATCG CTCCGGAATA
GGTAAATGCC TGCTTGCCTG GCAACCTGCA GCTGTACAGC AAAGTATTAT CGAAGGGCTG
ATCTGGGAGC AGGCGACACC CACAACGATT ACTCATCCAC AGCAACTTCA CGAAGAACTG
GCGCGTATTC GCCGTCAGGG CTGGAGCTAT GACAACGGCG AAGATTACGC CGATGTCCGT
TGTGTCGCTG CGCCGGTTTT TAACGCCAAT AACGAGCTTA CCGCTGCGAT CTCGGTGGTC
GGTACCCGCT TACAAATCAA TGAAGAATAC CGTGATTATC TGGCGGGCAA GGCCATTGCC
TGCGCCAGGG ATATTTCACG TCTGTTGGGA TGGAAAAGTC CCTTTGACTT ACAGGCCTCA
TAA
 
Protein sequence
MLESSKVPAL TRAIDILNLI ARIGPCSAAT IIDTLGIPKS TAYLLLNELR RQRFLSLDHQ 
ENFCLWTRLV ELSGHALSKM DLRELARPRL TQLMDTTGLL CHLGIIDNGS AYYILKVESS
ATISVRSHEG KSLSLYRSGI GKCLLAWQPA AVQQSIIEGL IWEQATPTTI THPQQLHEEL
ARIRRQGWSY DNGEDYADVR CVAAPVFNAN NELTAAISVV GTRLQINEEY RDYLAGKAIA
CARDISRLLG WKSPFDLQAS