Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2399 |
Symbol | |
ID | 6145227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2447422 |
End bp | 2448225 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617272 |
Product | putative aldolase |
Protein accession | YP_001744444 |
Protein GI | 170681725 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAT TATTAAGCAA TCCCTTTAAA GAACGTTTAC GCAAGGGCGA AGTGCAAATT GGTCTGTGGT TAAGCTCGAC TACTTCTTAT ATGGCAGAAA TTGCCGCCAC CTCCGGTTAT GACTGGTTGC TGATTGACGG GGAGCACGCG CCAAACACCA TTCAGGATCT TTATCACCAG CTACAGGCGG TAGCGCCCTA TGCCAGCCAA CCCGTGATCC GTCCGGTGGA AGCCAGTAAG TCGCTGATTA AACAAGTCCT GGATATTGGC GCGCAAACTC TACTGATCCC GATGGTCGAT ACTGCCGATC AGGCACGTCA GGTGGTGTCT GCCACGCGCT ATCCTCCCTA CGGTGAGCGT GGTGTTGGGG CCAGTGTGGC ACGGGCTGCT CGCTGGGGAC GCATTGAGAA TTACATGGCG CACGTCAACG ATTCGCTTTG TCTGTTGGTG CAGGTGGAAA GTAAGACGGC ACTGGATAAC CTGGACGAAA TCCTCGGCGT CGAAGGAATT GATGGCGTGT TTATTGGACC TGCGGATCTT TCTGCCTCGT TGGGCTACCC GGATAACGCC GGGCACCCGG AAGTGCAGCG AATTATTGAA ACCAGCATTC GGCGGATCCG TGCTGCGGGT AAAGCTGCTG GTTTTCTGGC TGTGGCTCCT GATATGGCGC AGCAATGCCT GGCGTGGGGA GCGAACTTTG TCGCTGTTGG CGTTGACACG ATGCTCTACA GCGATGCCCT GGATCAACGA CTGGCGATGT TTAAATCAGG CAAAAATGGG CCACGCGTAA AAGGTAGTTA TTGA
|
Protein sequence | MNALLSNPFK ERLRKGEVQI GLWLSSTTSY MAEIAATSGY DWLLIDGEHA PNTIQDLYHQ LQAVAPYASQ PVIRPVEASK SLIKQVLDIG AQTLLIPMVD TADQARQVVS ATRYPPYGER GVGASVARAA RWGRIENYMA HVNDSLCLLV QVESKTALDN LDEILGVEGI DGVFIGPADL SASLGYPDNA GHPEVQRIIE TSIRRIRAAG KAAGFLAVAP DMAQQCLAWG ANFVAVGVDT MLYSDALDQR LAMFKSGKNG PRVKGSY
|
| |