Gene EcSMS35_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2399 
Symbol 
ID6145227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2447422 
End bp2448225 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID641617272 
Productputative aldolase 
Protein accessionYP_001744444 
Protein GI170681725 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT TATTAAGCAA TCCCTTTAAA GAACGTTTAC GCAAGGGCGA AGTGCAAATT 
GGTCTGTGGT TAAGCTCGAC TACTTCTTAT ATGGCAGAAA TTGCCGCCAC CTCCGGTTAT
GACTGGTTGC TGATTGACGG GGAGCACGCG CCAAACACCA TTCAGGATCT TTATCACCAG
CTACAGGCGG TAGCGCCCTA TGCCAGCCAA CCCGTGATCC GTCCGGTGGA AGCCAGTAAG
TCGCTGATTA AACAAGTCCT GGATATTGGC GCGCAAACTC TACTGATCCC GATGGTCGAT
ACTGCCGATC AGGCACGTCA GGTGGTGTCT GCCACGCGCT ATCCTCCCTA CGGTGAGCGT
GGTGTTGGGG CCAGTGTGGC ACGGGCTGCT CGCTGGGGAC GCATTGAGAA TTACATGGCG
CACGTCAACG ATTCGCTTTG TCTGTTGGTG CAGGTGGAAA GTAAGACGGC ACTGGATAAC
CTGGACGAAA TCCTCGGCGT CGAAGGAATT GATGGCGTGT TTATTGGACC TGCGGATCTT
TCTGCCTCGT TGGGCTACCC GGATAACGCC GGGCACCCGG AAGTGCAGCG AATTATTGAA
ACCAGCATTC GGCGGATCCG TGCTGCGGGT AAAGCTGCTG GTTTTCTGGC TGTGGCTCCT
GATATGGCGC AGCAATGCCT GGCGTGGGGA GCGAACTTTG TCGCTGTTGG CGTTGACACG
ATGCTCTACA GCGATGCCCT GGATCAACGA CTGGCGATGT TTAAATCAGG CAAAAATGGG
CCACGCGTAA AAGGTAGTTA TTGA
 
Protein sequence
MNALLSNPFK ERLRKGEVQI GLWLSSTTSY MAEIAATSGY DWLLIDGEHA PNTIQDLYHQ 
LQAVAPYASQ PVIRPVEASK SLIKQVLDIG AQTLLIPMVD TADQARQVVS ATRYPPYGER
GVGASVARAA RWGRIENYMA HVNDSLCLLV QVESKTALDN LDEILGVEGI DGVFIGPADL
SASLGYPDNA GHPEVQRIIE TSIRRIRAAG KAAGFLAVAP DMAQQCLAWG ANFVAVGVDT
MLYSDALDQR LAMFKSGKNG PRVKGSY