Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2395 |
Symbol | glpC |
ID | 6145649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2444841 |
End bp | 2446031 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617268 |
Product | sn-glycerol-3-phosphate dehydrogenase subunit C |
Protein accession | YP_001744440 |
Protein GI | 170683880 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA CCAGCTTCGA AAACTGCATT AAGTGCACCG TCTGCACCAC CGCCTGCCCG GTGAGCCGGG TGAATCCGGG ATATCCGGGG CCAAAACAAG CCGGGCCGGA TGGCGAGCGT CTGCGTTTGA AAGATGGCGC ACTGTATGAC GAGGCACTGA AATATTGCAT CAACTGCAAA CGTTGCGAAG TCGCCTGCCC GTCCGATGTG AAGATTGGCG ATATCATCCA GCGCGCGCGG GCGAAATATG ACACCACACG CCCGTCGCTG CGCAATTTTG TGTTGAGTCA TACCGACCTG ATGGGTAGCG TTTCCACGCC ATTCGCACCA ATCGTCAATA CCGCTACCTC GCTGAAACCA GTGCGGCAGC TGCTTGATGC GGCGTTAAAA ATCGATCATC GCCGCACGCT ACCGAAATAC TCCTTCGGTA CGTTCCGTCG CTGGTATCGC AGCGTGGCGG CTCAGCAAGC GCAGTATAAA GACCAGGTCG CTTTCTTTCA CGGCTGCTTC GTTAACTACA ACCATCCGCA GTTAGGTAAA GATTTAATTA AAGTGCTCAA CGCAATGGGT ACCGGTGTAC AACTGCTCAG CAAAGAAAAA TGCTGCGGCG TACCGCTGAT CGCCAACGGC TTTACCGATA AAGCACGTAA ACAGGCAATT ACGAATGTAG AGTCGATCCG CGAAGCTGTG GGAGTAAAAG GCATTCCGGT GATTGCCACC TCCTCAACTT GTACATTTGC CCTGCGCGAC GAATACCCAG AAGTGCTGAA TGTAGACAAC AAAGGCTTGC GCGATCATAT CGAACTGGCG ACCCGCTGGC TGTGGCGCAA GCTGGACGAA GGCAAAACGT TACCGCTGAA AACGCTGCCG CTGAAAGTGG TTTATCACAC TCCGTGCCAT ATGGAAAAAA TGGGCTGGAC GCTCTACACC CTGGAGCTGT TGCGTAAAAT CCCGGGGCTT GAGTTAACGG TGCTGGATTC CCAGTGCTGC GGTATTGCGG GAACTTACGG TTTCAAAAAA GAGAACTACC CCACTTCACA AGCCATCGGC GCACCACTGT TCCGCCAGAT AGAAGAGAGC GGCGCAGATC TGGTGGTCAC CGACTGCGAA ACCTGTAAAT GGCAGATTGA GATGTCCACA AGTCTTCGCT GCGAACATCC GATTACGCTG CTGGCCCAGG CACTGGCTTA A
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Protein sequence | MNDTSFENCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFVLSHTDL MGSVSTPFAP IVNTATSLKP VRQLLDAALK IDHRRTLPKY SFGTFRRWYR SVAAQQAQYK DQVAFFHGCF VNYNHPQLGK DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI TNVESIREAV GVKGIPVIAT SSTCTFALRD EYPEVLNVDN KGLRDHIELA TRWLWRKLDE GKTLPLKTLP LKVVYHTPCH MEKMGWTLYT LELLRKIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQAIG APLFRQIEES GADLVVTDCE TCKWQIEMST SLRCEHPITL LAQALA
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