Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2386 |
Symbol | nrdB |
ID | 6146461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2434775 |
End bp | 2435956 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641617259 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001744431 |
Protein GI | 170682190 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGTA AAATGCCTTA TCCGGCATTA AACTCCCAAC AGGACACATT CATGGCATAT ACCACCTTTT CACAGACGAA AAATGATCAG CTGAAAGAAC CGATGTTCTT TGGTCAGCCG GTTAACGTGG CTCGCTACGA TCAGCAAAAA TATGACATCT TCGAAAAGCT GATCGAAAAG CAGCTCTCTT TCTTCTGGCG TCCGGAAGAA GTTGACGTTT CTCGTGACCG TATCGATTAC CAGGCACTAC CTGAACACGA AAAACACATC TTTATCAGCA ACCTGAAATA TCAGACGCTG CTGGACTCCA TTCAGGGTCG CAGCCCGAAC GTGGCACTGC TGCCGCTGAT CTCGATCCCG GAACTGGAAA CCTGGGTAGA AACCTGGGCG TTCTCAGAAA CGATTCATTC CCGCTCCTAT ACCCATATCA TCCGTAATAT CGTTAACGAT CCGTCAGTTG TCTTTGACGA TATCGTCACC AACGAGCAGA TCCAGAAACG TGCGGAAGGG ATCTCCAGCT ATTACGATGA ACTGATCGAA ATGACCAGCT ACTGGCATCT GCTGGGCGAA GGTACCCACA CCGTTAACGG TAAAACCGTA ACCGTTAGCC TGCGCGAGCT GAAGAAAAAA CTGTATCTCT GCCTGATGAG CGTTAACGCG CTGGAAGCGA TCCGCTTCTA CGTCAGCTTT GCTTGTTCCT TTGCCTTTGC AGAACGCGAA CTGATGGAAG GTAACGCCAA AATTATTCGC CTGATTGCCC GCGACGAAGC CCTGCACCTG ACCGGCACCC AGCATATGCT GAATCTGCTG CGCAGCGGCG CGGATGATCC GGAGATGGCG GAAATTGCCG AAGAATGTAA GCAGGAGTGC TATGACCTGT TTGTCCAGGC GGCACAGCAA GAGAAAGACT GGGCGGATTA TCTGTTCCGT GATGGTTCGA TGATTGGTCT GAATAAAGAC ATCCTCTGCC AGTACGTTGA ATACATCACC AATATCCGTA TGCAGGCAGT CGGTTTGGAT CTGCCGTTCC AGACGCGCTC CAACCCGATC CCGTGGATCA ACACTTGGTT GGTGTCTGAT AACGTACAGG TTGCTCCGCA GGAAGTGGAA GTGAGTTCTT ATCTGGTCGG GCAGATTGAC GCGGAAGTGG ACACCGACGA TTTGAGTAAC TTCCAGCTCT GA
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Protein sequence | MRRKMPYPAL NSQQDTFMAY TTFSQTKNDQ LKEPMFFGQP VNVARYDQQK YDIFEKLIEK QLSFFWRPEE VDVSRDRIDY QALPEHEKHI FISNLKYQTL LDSIQGRSPN VALLPLISIP ELETWVETWA FSETIHSRSY THIIRNIVND PSVVFDDIVT NEQIQKRAEG ISSYYDELIE MTSYWHLLGE GTHTVNGKTV TVSLRELKKK LYLCLMSVNA LEAIRFYVSF ACSFAFAERE LMEGNAKIIR LIARDEALHL TGTQHMLNLL RSGADDPEMA EIAEECKQEC YDLFVQAAQQ EKDWADYLFR DGSMIGLNKD ILCQYVEYIT NIRMQAVGLD LPFQTRSNPI PWINTWLVSD NVQVAPQEVE VSSYLVGQID AEVDTDDLSN FQL
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