Gene EcSMS35_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2386 
SymbolnrdB 
ID6146461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2434775 
End bp2435956 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content51% 
IMG OID641617259 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_001744431 
Protein GI170682190 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGTA AAATGCCTTA TCCGGCATTA AACTCCCAAC AGGACACATT CATGGCATAT 
ACCACCTTTT CACAGACGAA AAATGATCAG CTGAAAGAAC CGATGTTCTT TGGTCAGCCG
GTTAACGTGG CTCGCTACGA TCAGCAAAAA TATGACATCT TCGAAAAGCT GATCGAAAAG
CAGCTCTCTT TCTTCTGGCG TCCGGAAGAA GTTGACGTTT CTCGTGACCG TATCGATTAC
CAGGCACTAC CTGAACACGA AAAACACATC TTTATCAGCA ACCTGAAATA TCAGACGCTG
CTGGACTCCA TTCAGGGTCG CAGCCCGAAC GTGGCACTGC TGCCGCTGAT CTCGATCCCG
GAACTGGAAA CCTGGGTAGA AACCTGGGCG TTCTCAGAAA CGATTCATTC CCGCTCCTAT
ACCCATATCA TCCGTAATAT CGTTAACGAT CCGTCAGTTG TCTTTGACGA TATCGTCACC
AACGAGCAGA TCCAGAAACG TGCGGAAGGG ATCTCCAGCT ATTACGATGA ACTGATCGAA
ATGACCAGCT ACTGGCATCT GCTGGGCGAA GGTACCCACA CCGTTAACGG TAAAACCGTA
ACCGTTAGCC TGCGCGAGCT GAAGAAAAAA CTGTATCTCT GCCTGATGAG CGTTAACGCG
CTGGAAGCGA TCCGCTTCTA CGTCAGCTTT GCTTGTTCCT TTGCCTTTGC AGAACGCGAA
CTGATGGAAG GTAACGCCAA AATTATTCGC CTGATTGCCC GCGACGAAGC CCTGCACCTG
ACCGGCACCC AGCATATGCT GAATCTGCTG CGCAGCGGCG CGGATGATCC GGAGATGGCG
GAAATTGCCG AAGAATGTAA GCAGGAGTGC TATGACCTGT TTGTCCAGGC GGCACAGCAA
GAGAAAGACT GGGCGGATTA TCTGTTCCGT GATGGTTCGA TGATTGGTCT GAATAAAGAC
ATCCTCTGCC AGTACGTTGA ATACATCACC AATATCCGTA TGCAGGCAGT CGGTTTGGAT
CTGCCGTTCC AGACGCGCTC CAACCCGATC CCGTGGATCA ACACTTGGTT GGTGTCTGAT
AACGTACAGG TTGCTCCGCA GGAAGTGGAA GTGAGTTCTT ATCTGGTCGG GCAGATTGAC
GCGGAAGTGG ACACCGACGA TTTGAGTAAC TTCCAGCTCT GA
 
Protein sequence
MRRKMPYPAL NSQQDTFMAY TTFSQTKNDQ LKEPMFFGQP VNVARYDQQK YDIFEKLIEK 
QLSFFWRPEE VDVSRDRIDY QALPEHEKHI FISNLKYQTL LDSIQGRSPN VALLPLISIP
ELETWVETWA FSETIHSRSY THIIRNIVND PSVVFDDIVT NEQIQKRAEG ISSYYDELIE
MTSYWHLLGE GTHTVNGKTV TVSLRELKKK LYLCLMSVNA LEAIRFYVSF ACSFAFAERE
LMEGNAKIIR LIARDEALHL TGTQHMLNLL RSGADDPEMA EIAEECKQEC YDLFVQAAQQ
EKDWADYLFR DGSMIGLNKD ILCQYVEYIT NIRMQAVGLD LPFQTRSNPI PWINTWLVSD
NVQVAPQEVE VSSYLVGQID AEVDTDDLSN FQL