Gene EcSMS35_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2297 
SymbolmglB 
ID6143931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2325064 
End bp2326062 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content51% 
IMG OID641617171 
Productgalactose ABC transporter, periplasmic galactose-binding protein 
Protein accessionYP_001744344 
Protein GI170680313 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR01168] Gram-positive signal peptide, YSIRK family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.897545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00310991 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAGA AGGTGTTAAC CCTGTCTGCT GTGATGGCCA GCATGTTATT CGGTGCCGCT 
GCACACGCTG CTGATACTCG CATTGGTGTA ACAATCTATA AGTACGACGA TAACTTTATG
TCTGTGGTGC GCAAGGCTAT TGAGCAAGAT GCGAAAGCCG CGCCAGATGT TCAGCTGCTG
ATGAATGATT CTCAGAATGA CCAGTCCAAG CAGAACGATC AGATCGACGT ATTGCTGGCG
AAAGGGGTGA AGGCACTGGC AATCAACCTG GTTGACCCGG CAGCTGCGGG TACGGTGATT
GAGAAAGCGC GTGGGCAAAA CGTGCCGGTG GTTTTCTTCA ACAAAGAACC GTCTCGTAAG
GCGCTGGATA GCTACGACAA AGCCTACTAC GTTGGCACTG ACTCCAAAGA GTCCGGCATT
ATTCAGGGCG ATTTGATTGC TAAACACTGG GCGGCGAATC AGGGTTGGGA TCTGAACAAA
GACGGTCAGA TTCAGTTCGT ACTGCTGAAA GGTGAGCCGG GCCATCCGGA TGCAGAAGCA
CGTACCACTT ACGTGATTAA AGAATTGAAC GACAAAGGCA TCAAAACTGA ACAGTTACAG
TTAGATACCG CTATGTGGGA TACCGCTCAG GCGAAAGATA AGATGGACGC CTGGCTATCT
GGCCCGAACG CCAACAAAAT CGAAGTGGTT ATCGCCAACA ACGATGCGAT GGCAATGGGC
GCGGTAGAAG CACTGAAAGC ACACAACAAG TCCAGCATTC CGGTGTTTGG CGTCGATGCG
CTGCCAGAAG CGCTGGCGCT GGTGAAATCC GGTGCACTGG CGGGCACCGT ACTGAACGAT
GCTAACAACC AGGCGAAAGC GACCTTTGAT TTGGCGAAAA ACCTGGCCGA TGGCAAAGGT
GCGGCTGATG GCACCAACTG GAAAATCGAC AACAAAGTGG TCCGCGTACC TTATGTTGGC
GTAGATAAAG ACAACCTGGC TGAATTCAGC AAGAAATAA
 
Protein sequence
MNKKVLTLSA VMASMLFGAA AHAADTRIGV TIYKYDDNFM SVVRKAIEQD AKAAPDVQLL 
MNDSQNDQSK QNDQIDVLLA KGVKALAINL VDPAAAGTVI EKARGQNVPV VFFNKEPSRK
ALDSYDKAYY VGTDSKESGI IQGDLIAKHW AANQGWDLNK DGQIQFVLLK GEPGHPDAEA
RTTYVIKELN DKGIKTEQLQ LDTAMWDTAQ AKDKMDAWLS GPNANKIEVV IANNDAMAMG
AVEALKAHNK SSIPVFGVDA LPEALALVKS GALAGTVLND ANNQAKATFD LAKNLADGKG
AADGTNWKID NKVVRVPYVG VDKDNLAEFS KK