Gene EcSMS35_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2282 
SymbolmacA 
ID6142945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2308556 
End bp2309671 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content53% 
IMG OID641617156 
Productmacrolide transporter subunit MacA 
Protein accessionYP_001744329 
Protein GI170683052 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000339116 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0134871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC GGAAAACCGT GAAGAAGCGT TACGTTATTG CGCTGGTGAT AGTCATCGCC 
GGACTGATTA CGTTATGGAG AATTCTTAAC GCACCCGTTC CGACTTATCA GACGCTGATT
GTGCGCCCCG GTGATTTACA GCAAAGCGTG CTGGCGACCG GAAAGCTGGA CGCGCTGCGT
AAGGTTGACG TGGGCGCGCA GGTCAGCGGT CAGTTGAAAA CGCTGTCGGT GGCGATTGGC
GATAAAGTAA AAAAAGACCA GCTTTTAGGG GTTATTGATC CTGAACAGGC TGAAAACCAG
ATCAAGGAGG TGGAAGCAAC GCTGATGGAG CTACGCGCGC AGCGGCAGCA GGCGGAAGCG
GAGCTGAAAC TGGCGCGGGT GACGTATTCC CGTCAGCAAC GTCTTGCACA AACGCAAGCG
GTTTCACAGC AGGATCTCGA TACCGCCGCG ACGGAGATGG CTGTGAAACA GGCGCAAATT
GGCACCATTG ACGCGCAAAT CAAGCGCAAT CAGGCCTCAC TCGATACGGC TAAAACCAAT
CTCGATTACA CCCGCATCGT TGCCCCGATG GCCGGGGAAG TCACGCAAAT CACCACTCTG
CAAGGCCAGA CGGTGATTGC CGCACAACAA GCACCGAACA TTCTGACGCT GGCAGATATG
AGCACCATGC TGGTAAAAGC GCAGGTTTCT GAAGCGGATG TAATCCACCT GAAGCCGGGG
CAAAAAGCCT GGTTTACGGT ACTAGGCGAT CCGCTGACGC GCTATGAGGG GCAAATCAAG
GATGTGCTAC CGACGCCGGA AAAGGTTAAC GACGCTATTT TCTATTACGC CCGTTTTGAA
GTCCCCAACC CCAATGGTTT GCTGCGGCTG GATATGACCG CGCAAGTGCA TATTCAGCTC
ACCGATGTGA AAAATGTGCT GACGATCCCT CTGTTGGCGT TAGGCGATCC GGTTGGCGAT
AATCGTTATA AAGTCAAATT GTTGCGTAAT GGTGAAACAC GCGAGCGTGA AGTGACGATT
GGCGCACGTA ACGATACCGA TGTTGAGATT GTCAAAGGGC TGGAAGCGGG CGATGAAGTG
GTGATTGGTG AGGCCAAACC AGGAGCTGCA CAATGA
 
Protein sequence
MKKRKTVKKR YVIALVIVIA GLITLWRILN APVPTYQTLI VRPGDLQQSV LATGKLDALR 
KVDVGAQVSG QLKTLSVAIG DKVKKDQLLG VIDPEQAENQ IKEVEATLME LRAQRQQAEA
ELKLARVTYS RQQRLAQTQA VSQQDLDTAA TEMAVKQAQI GTIDAQIKRN QASLDTAKTN
LDYTRIVAPM AGEVTQITTL QGQTVIAAQQ APNILTLADM STMLVKAQVS EADVIHLKPG
QKAWFTVLGD PLTRYEGQIK DVLPTPEKVN DAIFYYARFE VPNPNGLLRL DMTAQVHIQL
TDVKNVLTIP LLALGDPVGD NRYKVKLLRN GETREREVTI GARNDTDVEI VKGLEAGDEV
VIGEAKPGAA Q