Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2282 |
Symbol | macA |
ID | 6142945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2308556 |
End bp | 2309671 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617156 |
Product | macrolide transporter subunit MacA |
Protein accession | YP_001744329 |
Protein GI | 170683052 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000339116 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0134871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGC GGAAAACCGT GAAGAAGCGT TACGTTATTG CGCTGGTGAT AGTCATCGCC GGACTGATTA CGTTATGGAG AATTCTTAAC GCACCCGTTC CGACTTATCA GACGCTGATT GTGCGCCCCG GTGATTTACA GCAAAGCGTG CTGGCGACCG GAAAGCTGGA CGCGCTGCGT AAGGTTGACG TGGGCGCGCA GGTCAGCGGT CAGTTGAAAA CGCTGTCGGT GGCGATTGGC GATAAAGTAA AAAAAGACCA GCTTTTAGGG GTTATTGATC CTGAACAGGC TGAAAACCAG ATCAAGGAGG TGGAAGCAAC GCTGATGGAG CTACGCGCGC AGCGGCAGCA GGCGGAAGCG GAGCTGAAAC TGGCGCGGGT GACGTATTCC CGTCAGCAAC GTCTTGCACA AACGCAAGCG GTTTCACAGC AGGATCTCGA TACCGCCGCG ACGGAGATGG CTGTGAAACA GGCGCAAATT GGCACCATTG ACGCGCAAAT CAAGCGCAAT CAGGCCTCAC TCGATACGGC TAAAACCAAT CTCGATTACA CCCGCATCGT TGCCCCGATG GCCGGGGAAG TCACGCAAAT CACCACTCTG CAAGGCCAGA CGGTGATTGC CGCACAACAA GCACCGAACA TTCTGACGCT GGCAGATATG AGCACCATGC TGGTAAAAGC GCAGGTTTCT GAAGCGGATG TAATCCACCT GAAGCCGGGG CAAAAAGCCT GGTTTACGGT ACTAGGCGAT CCGCTGACGC GCTATGAGGG GCAAATCAAG GATGTGCTAC CGACGCCGGA AAAGGTTAAC GACGCTATTT TCTATTACGC CCGTTTTGAA GTCCCCAACC CCAATGGTTT GCTGCGGCTG GATATGACCG CGCAAGTGCA TATTCAGCTC ACCGATGTGA AAAATGTGCT GACGATCCCT CTGTTGGCGT TAGGCGATCC GGTTGGCGAT AATCGTTATA AAGTCAAATT GTTGCGTAAT GGTGAAACAC GCGAGCGTGA AGTGACGATT GGCGCACGTA ACGATACCGA TGTTGAGATT GTCAAAGGGC TGGAAGCGGG CGATGAAGTG GTGATTGGTG AGGCCAAACC AGGAGCTGCA CAATGA
|
Protein sequence | MKKRKTVKKR YVIALVIVIA GLITLWRILN APVPTYQTLI VRPGDLQQSV LATGKLDALR KVDVGAQVSG QLKTLSVAIG DKVKKDQLLG VIDPEQAENQ IKEVEATLME LRAQRQQAEA ELKLARVTYS RQQRLAQTQA VSQQDLDTAA TEMAVKQAQI GTIDAQIKRN QASLDTAKTN LDYTRIVAPM AGEVTQITTL QGQTVIAAQQ APNILTLADM STMLVKAQVS EADVIHLKPG QKAWFTVLGD PLTRYEGQIK DVLPTPEKVN DAIFYYARFE VPNPNGLLRL DMTAQVHIQL TDVKNVLTIP LLALGDPVGD NRYKVKLLRN GETREREVTI GARNDTDVEI VKGLEAGDEV VIGEAKPGAA Q
|
| |