| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2256 |
|---|
| Symbol | |
|---|
| ID | 6146981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2276383 |
|---|
| End bp | 2277192 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641617132 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744305 |
|---|
| Protein GI | 170681060 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5039] Exopolysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.803632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA TGAAGTTAAA ATTTGATTTG CTTCTAAAAT CTTATCATCT ATCTCATCGA
TTTGTCTATA AGGCAAACCC TGGTAATGCT GGAGATGGTG TAATTGCATC TGCGACGTAT
GACTTTTTTG AACGAAATGC TCTTACCTAT ATCCCTTACA GAGATGGCGA GTGCTACAGT
TCTGAAACTG ATATTTTAAT TTTTGGAGGC GGAGGAAACC TGATAGAAGG ATTGTATTCT
GAAGGTCATG ACTTTATCCA GAATAATATT GGGAAATTTC ATAAAGTAAT AATAATGCCG
TCGACAATCA GAGGGTATAG CGATTTATTC ATCAACAATA TTGATAAGTT TGTTGTTTTT
TGTCGCGAAA ATATCACCTT CGATTATATT AAATCTCTCA ACTACGAACC AAACAAGAAC
GTATTCATTA CTGATGATAT GGCATTTTAT CTCGATCTTA ATAAATACCT GTCACTTAAA
CCCGTCTATA AAAAACAGGC CAACTGCTTC AGAACGGACT CCGAATCTCT AACTGGAGAC
TACAAAGAAA ACAATCATGA TATTTCGCTC ACCTGGAATG GCGATTATTG GGATAATGAA
TTTCTGGCGC GTAATTCTAC CCGTTGCATG ATAAACTTTC TTGAAGAGTA TAAAGTTGTC
AATACCGACA GGCTGCATGT GGCAATTTTA GCATCTCTGC TTGGCAAAGA AGTCAACTTC
TATCCTAACT CATATTACAA AAATGAAGCT GTTTACAATT ATTCACTTTT TAATCGTTAT
CCAAAAACAT GCTTTATTAC GGCAAGTTGA
|
|---|
| Protein sequence | MTNMKLKFDL LLKSYHLSHR FVYKANPGNA GDGVIASATY DFFERNALTY IPYRDGECYS
SETDILIFGG GGNLIEGLYS EGHDFIQNNI GKFHKVIIMP STIRGYSDLF INNIDKFVVF
CRENITFDYI KSLNYEPNKN VFITDDMAFY LDLNKYLSLK PVYKKQANCF RTDSESLTGD
YKENNHDISL TWNGDYWDNE FLARNSTRCM INFLEEYKVV NTDRLHVAIL ASLLGKEVNF
YPNSYYKNEA VYNYSLFNRY PKTCFITAS
|
|---|
| |