| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2202 |
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| Symbol | kdsB |
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| ID | 6143604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2215659 |
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| End bp | 2216405 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617078 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001744252 |
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| Protein GI | 170681729 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.173959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.258531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG TGGTCATTAT TCCCGCGCGC TACGCGTCCA CGCGTCTGCC CGGTAAACCA
TTGGTTGATA TTAACGGTAA ACCCATGATT GTTCATGTTC TTGAACGCGC GCGCGAATCA
GGTGCCGAGC GCATCATCGT GGCAACCGAT CATGAGGATG TTGCCCGCGC TGTTGAAGCC
GCTGGCGGTG AAGTATGTAT GACGCGCGCC GATCATCAGT CAGGAACAGA ACGTCTGGCG
GAAGTTGTCG AAAAATGCGC ATTCAGCGAC GACACGGTGA TCGTTAATGT GCAGGGGGAT
GAACCGATGA TCCCTGCGAC AATCATTCGT CAGGTTGCTG ATAATCTCGC CCAGCGTCAG
GTGGGTATGG CGACTCTGGC GGTGCCAATC CACAATGCGG AGGAAGCGTT TAACCCGAAT
GCGGTGAAAG TGGTCCTCGA CGCTGAAGGG TATGCACTGT ACTTCTCTCG CGCCACCATT
CCTTGGGATC GTGATCGTTT TGCAAAAGGC CTTGAAACCG TTGGCGATAA CTTCCTGCGT
CATCTTGGTA TTTATGGCTA CCGTGCAGGA TTTATCCGTC GTTACGTCAA CTGGCAGCCA
AGTCCGTTAG AACACATCGA AATGTTAGAG CAGCTTCGTG TTCTGTGGTA CGGCGAAAAA
ATCCATGTTG CTGTCGCCCA GGAAGTTCCT GGCACAGGTG TGGATACCCC TGAAGATCTC
GAGCGCGTTC GCGCTGAAAT GCGCTAA
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| Protein sequence | MSFVVIIPAR YASTRLPGKP LVDINGKPMI VHVLERARES GAERIIVATD HEDVARAVEA
AGGEVCMTRA DHQSGTERLA EVVEKCAFSD DTVIVNVQGD EPMIPATIIR QVADNLAQRQ
VGMATLAVPI HNAEEAFNPN AVKVVLDAEG YALYFSRATI PWDRDRFAKG LETVGDNFLR
HLGIYGYRAG FIRRYVNWQP SPLEHIEMLE QLRVLWYGEK IHVAVAQEVP GTGVDTPEDL
ERVRAEMR
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