| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2170 |
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| Symbol | uup |
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| ID | 6144963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2175723 |
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| End bp | 2177630 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617046 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_001744220 |
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| Protein GI | 170681436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000710719 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.220785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTAA TCAGTATGCA TGGCGCATGG CTGTCGTTCA GCGACGCGCC GCTTCTCGAT
AACGCAGAAC TGCATATCGA AGATAACGAA CGTGTTTGTC TGGTAGGTCG TAACGGCGCA
GGCAAATCGA CGTTAATGAA GATCCTCAAC CGTGAACAGG GGCTGGATGA CGGTCGCATT
ATTTATGAGC AAGATTTGAT TGTAGCTCGT CTGCAACAGG ATCCGCCGCG TAACGTTGAG
GGTAGCGTTT ATGATTTCGT TGCCGAAGGC ATTGAAGAAC AAGCGGAATA TCTGAAACGC
TATCACGATC TTTCGCGCCT GGTGATGAAC GACCCGAGCG AGAAAAATCT CAACGAACTG
GCGAAGGTTC AGGAACAGCT GGATCACCAC AACCTGTGGC AGCTGGAAAA CCGCATCAAC
GAAGTGCTGG CGCAACTGGG ATTAGATCCT AATGTTGCGC TGTCGTCGCT TTCCGGCGGC
TGGTTGCGTA AAGCGGCATT AGGACGCGCG CTGGTGAGCA ATCCGCGTGT ATTGCTGCTC
GACGAACCGA CTAACCACCT GGATATTGAA ACCATCGACT GGCTGGAAGG GTTCCTCAAA
ACCTTCAATG GGACAATTAT TTTCATTTCC CACGACCGTT CGTTTATCCG CAATATGGCG
ACGCGCATTG TTGATCTCGA TCGCGGCAAG CTGGTGACCT ATCCAGGGAA TTACGACCAG
TACCTGCTGG AAAAAGAAGA AGCCCTGCGC GTGGAAGAAT TACAAAATGC CGAGTTCGAT
CGCAAACTGG CGCAGGAAGA GGTGTGGATC CGCCAGGGGA TCAAAGCGCG CCGTACCCGT
AATGAAGGCC GCGTACGCGC CCTGAAAGCA ATGCGCCGTG AACGTAGCCA GCGCCGTGAG
GTCATGGGGA CGGCAAAGAT GCAGGTGGAA GAAGCCAGCC GCTCCGGAAA GATCGTTTTC
GAAATGGAAG ACGTTTGCTA CCAGGTTGAC GGTAAGCAAC TGGTGAAAGA TTTTTCTGCC
CAGGTTCTAC GTGGCGACAA AATTGCCCTG ATTGGCCCGA ATGGGTGCGG CAAAACCACG
CTGCTGAAAC TGATGCTCGG TCAGCTTCAG GCGGACAGCG GGCGTATTCA CGTTGGCACC
AAACTGGAAG TGGCTTATTT CGATCAGCAC CGTGCGGAAC TGGATCCCGA TAAAACGGTG
ATGGATAACC TTGCCGAAGG TAAGCAAGAG GTGATGGTTA ACGGCAAGCC ACGCCACGTA
TTGGGCTATT TGCAGGACTT CCTGTTCCAT CCGAAACGGG CGATGACGCC GGTACGTGCG
CTTTCTGGCG GTGAGCGGAA CCGCTTGCTG CTGGCGCGTT TGTTCCTCAA ACCAAGCAAC
TTATTGATTC TTGACGAACC GACCAACGAT CTTGATGTCG AAACGCTGGA ACTGCTGGAA
GAACTGATCG ACAGCTACCA GGGCACGGTA TTGCTGGTAA GCCACGATCG TCAGTTTGTC
GATAACACCG TTACAGAATG CTGGATCTTC GAAGGCGGCG GTAAAATTGG TCGTTATGTC
GGCGGTTATC ATGATGCCCG TGGTCAGCAA GAGCAGTATG TGGCGCTCAA ACAGCCTGCG
GTGAAAAAAA CCGAAGAAGC CGCCGCGGCA AAAGCAGAAA CTGTAAAACG CAGCAGTAGC
AAACTAAGCT ATAAATTGCA GCGCGAACTG GAGCAGCTAC CGCAATTGCT TGAAGATCTG
GAGGCGAAGC TGGAAGCCCT ACAGACGCAG GTGGCGGATG CTTCCTTCTT CAGTCAGCCC
CATGAGCAGA CACAAAAAGT GCTCGCTGAT ATGGCTGCTG CAGAGCAGGA GCTGGAGCAA
GCCTTTGAAC GCTGGGAGTA TCTTGAAGCG TTAAAAAATG GTGGCTGA
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| Protein sequence | MSLISMHGAW LSFSDAPLLD NAELHIEDNE RVCLVGRNGA GKSTLMKILN REQGLDDGRI
IYEQDLIVAR LQQDPPRNVE GSVYDFVAEG IEEQAEYLKR YHDLSRLVMN DPSEKNLNEL
AKVQEQLDHH NLWQLENRIN EVLAQLGLDP NVALSSLSGG WLRKAALGRA LVSNPRVLLL
DEPTNHLDIE TIDWLEGFLK TFNGTIIFIS HDRSFIRNMA TRIVDLDRGK LVTYPGNYDQ
YLLEKEEALR VEELQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRRERSQRRE
VMGTAKMQVE EASRSGKIVF EMEDVCYQVD GKQLVKDFSA QVLRGDKIAL IGPNGCGKTT
LLKLMLGQLQ ADSGRIHVGT KLEVAYFDQH RAELDPDKTV MDNLAEGKQE VMVNGKPRHV
LGYLQDFLFH PKRAMTPVRA LSGGERNRLL LARLFLKPSN LLILDEPTND LDVETLELLE
ELIDSYQGTV LLVSHDRQFV DNTVTECWIF EGGGKIGRYV GGYHDARGQQ EQYVALKQPA
VKKTEEAAAA KAETVKRSSS KLSYKLQREL EQLPQLLEDL EAKLEALQTQ VADASFFSQP
HEQTQKVLAD MAAAEQELEQ AFERWEYLEA LKNGG
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