| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2120 |
|---|
| Symbol | wrbA |
|---|
| ID | 6145176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2128923 |
|---|
| End bp | 2129519 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641616996 |
|---|
| Product | TrpR binding protein WrbA |
|---|
| Protein accession | YP_001744171 |
|---|
| Protein GI | 170684184 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG TTCTGGTGCT TTATTATTCC ATGTACGGAC ATATTGAAAC GATGGCACGC
GCAGTCGCTG AGGGTGCAAG CAAAGTGGAT GGCGCAGAAG TTGTCGTTAA GCGTGTACCG
GAAACCATGC CGCCGCAATT ATTTGAAAAA GCAGGTGGTA AAACGCAAAC TGCACCGGTT
GCAACCCCGC AAGAACTGGC CGATTACGAC GCCATTATTT TTGGTACACC TACCCGCTTT
GGCAACATGT CCGGTCAAAT GCGTACCTTC CTCGACCAGA CGGGCGGCCT GTGGGCTTCC
GGCGCACTAT ACGGAAAACT GGCGAGCGTC TTTAGTTCCA CCGGTACTGG CGGCGGTCAG
GAACAAACCA TCACATCCAC CTGGACGACC CTTGCGCATC ACGGCATGGT GATTGTCCCC
ATTGGCTACG CAGCGCAGGA ATTATTTGAC GTTTCACAGG TTCGCGGCGG TACGCCGTAC
GGCGCAACCA CCATCGCAGG CGGTGACGGT TCACGCCAGC CCAGCCAGGA AGAACTGTCT
ATTGCTCGTT ATCAAGGGGA ATATGTCGCA GGTCTGGCAG TTAAACTTAA CGGCTAA
|
|---|
| Protein sequence | MAKVLVLYYS MYGHIETMAR AVAEGASKVD GAEVVVKRVP ETMPPQLFEK AGGKTQTAPV
ATPQELADYD AIIFGTPTRF GNMSGQMRTF LDQTGGLWAS GALYGKLASV FSSTGTGGGQ
EQTITSTWTT LAHHGMVIVP IGYAAQELFD VSQVRGGTPY GATTIAGGDG SRQPSQEELS
IARYQGEYVA GLAVKLNG
|
|---|
| |