| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2116 |
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| Symbol | |
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| ID | 6144556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2125041 |
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| End bp | 2125853 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641616992 |
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| Product | putative rutD protein |
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| Protein accession | YP_001744167 |
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| Protein GI | 170681429 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR03611] pyrimidine utilization protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTT CACTCTCACC TCCCCCTTAT GCTGATGCGC CCGTAGTGGT GTTGATTTCG
GGTCTTGGCG GTAGCGGCAG TTACTGGTTA CCGCAACTGG CGGTGCTGGA GCAGGAGTAT
CAGGTAGTCT GTTACGACCA GCGCGGCACC GGCAATAATC CCGACACGCT GGCAGAAGAT
TACAGTATCG CCCAGATGGC AGCGGAACTG CATCAGGCGC TGGTAGCCGC AGGGATTGAG
CGTTACGCGG TGGTCGGCCA TGCGCTCGGT GCGCTGGTGG GAATGCAGCT GGCGCTGGAT
TATCCCGCGT CGGTAACTGT GCTGGTCAGC GTTAACGGCT GGCTACGAAT AAACGCCCAT
ACGCGCCGCT GTTTTCAGGT TCGCGAGCAG TTACTACATA GCGGCGGCGC GCAGGCATGG
GTGGAAGCGC AGCCATTGTT CCTCTATCCC GCCGACTGGA TGGCGGCCCG CGCACCTCGC
CTGGAAGCTG AAGACGCGCT GGCACTGGCG CATTTTCAGG GCAAAAATAA TTTACTGCGT
CGACTTAACG CCCTCAAACG CGCTGACTTT AGTCGCCATG CGGATCGCAT CCGCTGCCCG
GTGCAAATCA TCTGCGCCAG TGATGATCTT CTGGTGCCAA CAGCATGTTC CAGTGAACTT
CATGCCGCCC TGCCCGATAG CCAGAAAATG GTGATGCGCT ATGGCGGACA CGCCTGCAAC
GTGACCGATC CCGAAACGTT TAATGCTCTG TTACTCAACG GGCTTGCCAG CCTGTTACAT
CACCGTGAAG CCGCCTGTAA GGAATTGCTA TGA
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| Protein sequence | MKLSLSPPPY ADAPVVVLIS GLGGSGSYWL PQLAVLEQEY QVVCYDQRGT GNNPDTLAED
YSIAQMAAEL HQALVAAGIE RYAVVGHALG ALVGMQLALD YPASVTVLVS VNGWLRINAH
TRRCFQVREQ LLHSGGAQAW VEAQPLFLYP ADWMAARAPR LEAEDALALA HFQGKNNLLR
RLNALKRADF SRHADRIRCP VQIICASDDL LVPTACSSEL HAALPDSQKM VMRYGGHACN
VTDPETFNAL LLNGLASLLH HREAACKELL
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