| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2039 |
|---|
| Symbol | |
|---|
| ID | 6145552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2059212 |
|---|
| End bp | 2059733 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641616915 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744091 |
|---|
| Protein GI | 170683047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000123338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0000303245 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGG TAAAATTACC CCTGACTCTC GATCCGGTTC GTACGGCTCA AAAACGCCTT
GATTACCAGG GTATCTATAC TCCTGATCAG GTTGAGCGCG TCGCCGAATC CGTAGTCAGT
GTGGACAGTG ATGTGGAATG CTCCATGTCG TTCGCTATCG ATAACCAACG TCTCGCAGTG
TTAAACGGCG ATGCGAAGGT GACGGTAACG CTCGAGTGTC AGCGTTGCGG GAAGCCGTTT
ACTCATCAGG TCTACACAAC GTATTGTTTT AGTCCTGTGC GTTCAGACGA ACAGGCTGAA
GCACTGCCGG AAGCGTATGA ACCGATTGAG GTTAACGAAT TCGGTGAAAT CGATCTGCTT
GCAATGGTTG AAGATGAAAT CATCCTCGCC TTGCCGGTAG TTCCGGTGCA TGATTCTGAA
CACTGTGAAG TGTCCGAAGC GGACATGGTC TTTGGTGAAC TGCCTGAAGA AGCGCAAAAG
CCAAACCCAT TTGCCGTATT AGCCAGCTTA AAGCGTAAGT AA
|
|---|
| Protein sequence | MQKVKLPLTL DPVRTAQKRL DYQGIYTPDQ VERVAESVVS VDSDVECSMS FAIDNQRLAV
LNGDAKVTVT LECQRCGKPF THQVYTTYCF SPVRSDEQAE ALPEAYEPIE VNEFGEIDLL
AMVEDEIILA LPVVPVHDSE HCEVSEADMV FGELPEEAQK PNPFAVLASL KRK
|
|---|
| |