Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2029 |
Symbol | tmk |
ID | 6145683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2050762 |
End bp | 2051403 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641616905 |
Product | thymidylate kinase |
Protein accession | YP_001744081 |
Protein GI | 170679734 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000357383 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000127305 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCAGTA AGTATATCGT CATTGAGGGG CTGGAAGGCG CAGGCAAAAC TACCGCGCGT AACGTGGTGG TTGAGACGCT CGAGCAACTG GGTATCCGCG ACATGGTTTT CACTCGGGAA CCTGGCGGTA CGCAACTTGC CGAAAAGTTA AGAAGCCTGG TGCTGGATAT CAAATCGGTA GGCGATGAAG TCATTACCGA TAAAGCCGAA GTTCTGATGT TTTATGCCGC GCGCGTTCAA CTGGTAGAAA CGGTCATCAA ACCAGCGCTG GCTAACGGCA CTTGGGTGAT TGGCGATCGC CACGATCTCT CCACTCAGGC GTATCAGGGC GGCGGACGTG GTATTGACCA ACATATGCTG GCAACATTGC GTGATGCTGT TCTCGGGGAT TTTCGCCCCG ACTTAACGCT CTATCTCGAT GTTACCCCGG AAGTTGGCTT AAAACGTGCG CGTGCTCGCG GCGAGCTGGA TCGTATTGAG CAAGAGTCTT TCGATTTCTT TAATCGCACC CGCGCCCGCT ATCTGGAACT GGCAGCACAA GATAAAAGCA TTCATACCAT TGATGCCACC CAGCCGCTGG AGTCCGTGAT GGATGCAATC CGCACTACCG TGACCAATTG GGTGAAGGAG TTGGACGCAT GA
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Protein sequence | MRSKYIVIEG LEGAGKTTAR NVVVETLEQL GIRDMVFTRE PGGTQLAEKL RSLVLDIKSV GDEVITDKAE VLMFYAARVQ LVETVIKPAL ANGTWVIGDR HDLSTQAYQG GGRGIDQHML ATLRDAVLGD FRPDLTLYLD VTPEVGLKRA RARGELDRIE QESFDFFNRT RARYLELAAQ DKSIHTIDAT QPLESVMDAI RTTVTNWVKE LDA
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