Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1995 |
Symbol | phoP |
ID | 6146678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2016063 |
End bp | 2016734 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641616871 |
Product | DNA-binding transcriptional regulator PhoP |
Protein accession | YP_001744047 |
Protein GI | 170681232 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTAC TGGTTGTTGA AGACAATGCG TTGTTACGTC ACCATCTTAA AGTTCAGATT CAGGATGCTG GTCATCAGGT CGATGACGCA GAAGATGCCA AAGAAGCCGA TTATTATCTC AATGAACATT TACCGGATAT TGCGATTGTC GATCTCGGAT TGCCTGACGA GGATGGTCTG TCACTGATTC GCCGCTGGCG TAGCAATGAT GTTTCACTGC CGATTCTGGT ATTAACCGCC CGTGAAAGCT GGCAGGACAA AGTCGAAGTA TTAAGTGCCG GTGCTGATGA TTACGTGACT AAACCGTTTC ATATTGAAGA GGTGATGGCG CGAATGCAGG CATTAATGCG GCGTAATAGC GGTCTGGCTT CACAGGTCAT TTCGCTACCA CCGTTTCAGG TTGATCTCTC CCGCCGTGAA TTATCTATTA ATGACGAAGT GATCAAACTA ACCGCGTTCG AATACACCAT TATGGAAACG TTGATACGCA ATAATGGCAA AGTGGTCAGC AAAGATTCGT TAATGCTACA ACTCTACCCG GATGCGGAGC TGCGGGAAAG CCATACCATT GATGTACTGA TGGGACGTCT GCGCAAAAAA ATTCAGGCAC AATATCCGCA AGAAGTGATT ACCACCGTTC GCGGCCAGGG CTATCTGTTC GAATTGCGCT GA
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Protein sequence | MRVLVVEDNA LLRHHLKVQI QDAGHQVDDA EDAKEADYYL NEHLPDIAIV DLGLPDEDGL SLIRRWRSND VSLPILVLTA RESWQDKVEV LSAGADDYVT KPFHIEEVMA RMQALMRRNS GLASQVISLP PFQVDLSRRE LSINDEVIKL TAFEYTIMET LIRNNGKVVS KDSLMLQLYP DAELRESHTI DVLMGRLRKK IQAQYPQEVI TTVRGQGYLF ELR
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