| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1992 |
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| Symbol | mnmA |
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| ID | 6145513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2012737 |
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| End bp | 2013843 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616868 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001744044 |
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| Protein GI | 170682526 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.987691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA CCGCAAAAAA AGTAATCGTC GGCATGTCCG GCGGTGTCGA TTCCTCCGTT
TCTGCCTGGC TGTTGCAACA ACAGGGATAT CAGGTCGAAG GCCTGTTTAT GAAGAACTGG
GAAGAAGACG ACGGTGAGGA ATATTGCACA GCGGCAGCGG ATCTGGCTGA TGCCCAGGCT
GTCTGCGACA AGCTCGGCAT TGAACTGCAC ACCGTTAACT TTGCTGCCGA GTACTGGGAC
AACGTCTTCG AACTGTTCCT TGCCGAATAT AAAGCCGGTC GCACGCCGAA TCCGGATATT
CTGTGCAACA AAGAGATCAA ATTTAAAGCC TTCCTCGAAT TTGCCGCCGA AGATTTAGGT
GCCGATTATA TCGCTACCGG TCATTACGTA CGTCGGGCAG ATGTCGATGG CAAGAGCCGC
CTGCTGCGTG GTCTGGACAG CAATAAAGAC CAGAGCTACT TCCTTTATAC GCTTAGCCAT
GAGCAGATTG CGCAAAGCCT GTTCCCGGTC GGCGAACTGG AAAAACCGCA GGTGCGTAAG
ATTGCTGAAG ATCTTGGTCT GGTCACCGCG AAGAAAAAAG ACTCTACCGG CATTTGCTTC
ATTGGCGAAC GTAAATTCCG CGAGTTCCTG GGCCGTTATC TCCCGGCGCA ACCGGGCAAA
ATCATTACCG TCGATGGCGA TGAAATTGGT GAGCACCAGG GGCTGATGTA TCACACTCTC
GGTCAGCGTA AAGGTCTGGG TATCGGTGGC ACCAAAGAAG GCACCGAAGA ACCGTGGTAT
GTGGTCGATA AAGACGTCGA AAACAACATT CTGATTGTTG CGCAGGGCCA TGAACACCCG
CGTCTGATGT CTGTCGGTCT GATTGCCCAG CAGCTGCACT GGGTCGATCG CGAACCATTC
ACCGGCACTA TGCGTTGCAC GGTAAAAACC CGCTATCGCC AGACCGATAT CCCCTGCACC
GTCAAGGCGC TGGACGATGA TCGCATTGAA GTGATTTTCG ATGAGCCGGT TGCCGCCGTG
ACGCCGGGCC AGTCTGCCGT TTTTTATAAC GGTGAGGTGT GCCTCGGTGG CGGTATTATT
GAGCAGCGTC TGCCGCTGCC GGTCTGA
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| Protein sequence | MSETAKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA
VCDKLGIELH TVNFAAEYWD NVFELFLAEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG
ADYIATGHYV RRADVDGKSR LLRGLDSNKD QSYFLYTLSH EQIAQSLFPV GELEKPQVRK
IAEDLGLVTA KKKDSTGICF IGERKFREFL GRYLPAQPGK IITVDGDEIG EHQGLMYHTL
GQRKGLGIGG TKEGTEEPWY VVDKDVENNI LIVAQGHEHP RLMSVGLIAQ QLHWVDREPF
TGTMRCTVKT RYRQTDIPCT VKALDDDRIE VIFDEPVAAV TPGQSAVFYN GEVCLGGGII
EQRLPLPV
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