| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1940 |
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| Symbol | dhaR |
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| ID | 6145166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1960779 |
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| End bp | 1962698 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616816 |
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| Product | DNA-binding transcriptional regulator DhaR |
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| Protein accession | YP_001743992 |
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| Protein GI | 170682289 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.407613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0958242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGCG CTTTTAACAA CGATGGTCGG GACATATCTC CCTTAATTGC AACCTCCTGG
GAGCGATGCA TTAAGCTGAT GAAACGGGAG ACATGGAACG TACCACACCA GGCCCAGGGC
GTGACATTTG CTTCTATTTA TCGGCGTAAG AAAGCGATGC TGACGCTCGG GCAGGCTGCG
CTGGAAGATG CCTGGGAATA TATGGCACCG CGAGAGTGTG CGTTGCTTAT CCTCGATGAA
ACCGCCTGCA TTCTCAGCCG TAATGGCGAT CCGCAAACCT TGCAGCAGCT AAGTGCACTG
GGATTCAATG ACGGCACGTA TTGCGCCGAG GGAATTATTG GTACTTGTGC GCTATCATTA
GCGGCTATCT CTGGTCAGGC CGTGAAAACG ATGGCCGATC AACATTTCAA ACAGGCACTC
TGGAACTGGG CCTTTTGTGC AACGCCGTTG TTTGACAGCA AGGGCCGATT GACGGGAACA
ATAGCGCTGG CGTGTCCGGT TGAACAAACT ACCGCAGCTG ATTTGCCGTT GACGTTGGCA
ATCGCACGCG AGGTCGGAAA TTTACTGCTG ACGGACAGTT TGCTCGCTGA AACTAACCGT
CATTTAAATC AACTTAATGC CCTGTTAGAA AGTATGGATG ATGGCGTGAT TAGCTGGGAC
GAGCAGGGTA ATTTGCAATT TATCAATGCC CAGGCGGCGC GGGTCTTGCG CCTTGACGCG
ACGGCAAGTC AGGGAAGGGC GATCACTGAA CTCTTAACGT TACCCGCCGT ATTGCAACAA
GCAATAAAAC AGGCACATCC GCTCAAACAC GTAGAAGCAA CCTTTGAAAG TCAGCACCAG
TTTATTGATG CGGTGATAAC CCTTAAACCG ATAATAGAAA CGCAGGGAAC CAGCTTTATT
TTGTTGCTCC ATCCTGTGGA ACAGATGCGG CAGTTAATGA CCAGTCAATT AGGAAAAGTC
AGCCATACTT TCGCTCATAT GCCACAGGAC GATCCGCAAA CCCGCCGCTT GATTCATTTT
GGTCGCCAGG CGGCGCGCAG TAGCCTTCCT GTCCTGCTTT GTGGAGAAGA GGGCGTGGGC
AAGGCACTGC TAAGTCAGGC AATTCATAAT GAAAGTGAGC GTGCAGCGGG GCCTTATATC
GCCGTCAATT GTGAGTTATA TGGTGATGCG GCGCTGGCGG AAGAATTTAT TGGCGGCGAT
CGCACGGACA ATGAAAATGG TCGTCTGAGT CGGCTGGAAC TGGCGCACGG CGGCACGCTG
TTTCTTGAAA AGATTGAATA TCTGGCGGTG GAGTTACAGT CTGCTTTGCT TCAGGTTATC
AAGCAGGGGG TTATCACGCG ACTGGATGCG CGGCGTTTAA TACCCATTGA TGTCAAAGTG
ATTGCCACAA CGACCGCGGA CCTCGCAATG CTGGTGGAAC AAAATCGTTT TAGTCGCCAG
CTGTATTACG CGCTGCATGC ATTTGAAATT ACCATCCCGC CACTGCGTAT GCGGCGTGGC
AGCATTCCGG CGCTGGTGAA TAACAAATTA CGCAGCCTTG AAAAACGCTT CTCTACGCGG
CTGAAAATTG ATGACGATGC CCTCGCTCGC CTGGTTTCTT GTGCATGGCC AGGCAACGAT
TTTGAACTTT ACAGCGTCAT CGAGAATCTT GCTCTGAGTA GTGATAACGG GCGCATTCGC
GTCAGTGATT TACCTGAACA TCTGTTTACC GAGCAGGCGA CAGATGATGT CAGCGCCACT
CGCCTTACCA CCAGTCTGTC ATTTGCGGAA GTTGAAAAAG AGGCAATTAT TAACGCAGCC
CAGGTCACAG GCGGTCGCAT TCAGGAAATG TCGGCTTTAC TTGGAATCGG CCGCACTACG
CTGTGGCGGA AAATGAAGCA ACATGGCATT GATGCAGGGC AGTTTAAGCG CCGTGGATAG
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| Protein sequence | MSGAFNNDGR DISPLIATSW ERCIKLMKRE TWNVPHQAQG VTFASIYRRK KAMLTLGQAA
LEDAWEYMAP RECALLILDE TACILSRNGD PQTLQQLSAL GFNDGTYCAE GIIGTCALSL
AAISGQAVKT MADQHFKQAL WNWAFCATPL FDSKGRLTGT IALACPVEQT TAADLPLTLA
IAREVGNLLL TDSLLAETNR HLNQLNALLE SMDDGVISWD EQGNLQFINA QAARVLRLDA
TASQGRAITE LLTLPAVLQQ AIKQAHPLKH VEATFESQHQ FIDAVITLKP IIETQGTSFI
LLLHPVEQMR QLMTSQLGKV SHTFAHMPQD DPQTRRLIHF GRQAARSSLP VLLCGEEGVG
KALLSQAIHN ESERAAGPYI AVNCELYGDA ALAEEFIGGD RTDNENGRLS RLELAHGGTL
FLEKIEYLAV ELQSALLQVI KQGVITRLDA RRLIPIDVKV IATTTADLAM LVEQNRFSRQ
LYYALHAFEI TIPPLRMRRG SIPALVNNKL RSLEKRFSTR LKIDDDALAR LVSCAWPGND
FELYSVIENL ALSSDNGRIR VSDLPEHLFT EQATDDVSAT RLTTSLSFAE VEKEAIINAA
QVTGGRIQEM SALLGIGRTT LWRKMKQHGI DAGQFKRRG
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