| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1864 |
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| Symbol | rluB |
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| ID | 6143814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1886685 |
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| End bp | 1887560 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616740 |
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| Product | 23S rRNA pseudouridylate synthase B |
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| Protein accession | YP_001743918 |
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| Protein GI | 170682451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000000000661811 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA AGCTACAGAA AGTGCTGGCG CGTGCCGGCC ACGGCTCTCG CCGTGAAATC
GAATCTATTA TTGAAGCCGG TCGTGTGAGT GTTGATGGCA AAATTGCTAA ACTCGGCGAT
CGCGTTGAAG TTACCCCTGG ATTGAAAATC CGTATCGATG GTCACCTGAT TTCGGTACGT
GAGTCCGCTG AACAAATTTG TCGCGTTCTG GCCTATTACA AACCGGAAGG TGAGTTGTGT
ACCCGTAACG ATCCGGAAGG ACGTCCAACG GTGTTTGACC GTCTGCCAAA ACTGCGTGGC
GCACGCTGGA TTGCCGTGGG GCGCCTGGAC GTTAATACCT GTGGTCTGCT GCTGTTCACC
ACCGATGGTG AACTGGCAAA CCGTTTAATG CACCCAAGCC GTGAAGTTGA ACGTGAATAT
GCCGTGCGTG TATTTGGTCA GGTTGACGAC GCGAAACTGC GTGATTTGAG TCGTGGCGTG
CAGTTGGAAG ATGGTCCGGC AGCCTTTAAA ACCATCAAGT TCAGCGGCGG CGAAGGGATC
AACCAGTGGT ACAACGTTAC TCTGACCGAA GGCCGTAACC GTGAAGTTCG TCGTCTTTGG
GAAGCGGTTG GTGTGCAGGT GAGCCGTCTG ATCCGCGTGC GTTACGGTGA TATCCCACTG
CCGAAAGGTC TGCCACGCGG TGGCTGGACG GAGCTGGACC TCGCCCAGAC TAACTATCTG
CGTGAGCTGG TGGAACTACC GCCAGAAACC AGCTCTAAAG TTGCTGTAGA AAAAGACCGT
CGTCGTATGA AGGCGAATCA AATTCGTCGT GCGGTGAAAC GTCACAGCCA GGTCAGCGGC
GGTCGTCGTT CTGGTGGACG TAATAATAAC GGTTAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIAKLGD RVEVTPGLKI RIDGHLISVR
ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT
TDGELANRLM HPSREVEREY AVRVFGQVDD AKLRDLSRGV QLEDGPAAFK TIKFSGGEGI
NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL
RELVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQVSG GRRSGGRNNN G
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