| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1860 |
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| Symbol | |
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| ID | 6146680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1883797 |
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| End bp | 1884555 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616736 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001743914 |
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| Protein GI | 170681806 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000000000976812 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTACC AGCCAAAACA AGATTTACTC AATGATCGCA TTATCCTGGT GACGGGAGCC
AGCAATGGTA TTGGTCGTGA AGCCGCGATG ACGTATGCAC GCTATGGTGC GACAGTGATT
CTGTTGGGCC GTAATGAAGA AAAATTACGT CAGGTAGCCA GCCACATAAA CGAAGAAACT
GGGCGTCAGC CACAGTGGTT TATTCTCGAT TTGCTGACCT GCACGTCCGA AGATTGCCAA
CAACTGGCAC AGCGCATTGC CGTTAATTAT CCGCGTCTGG ATGGTGTTTT GCATAATGCC
GGATTGCTCG GCGATGTTTG TCCAATGAGC GAACAAAATC CACAGGTCTG GCAGGACGTC
ATACAGGTCA ACGTTAATGC CACCTTTATG CTCACCCAGG CACTGCTTCC TTTATTACTC
AAATCGGACG CCGGTTCACT GGTCTTTACT TCATCAAGCG TTGGACGTCA GGGGCGTGCA
AACTGGGGCG CTTATGCAGC GTCGAAATTT GCCACCGAAG GGATGATGCA GGTACTGGCC
GATGAATATC AGCAGCGCCT GCGCGTCAAC TGCATTAACC CAGGCGGTAC GCGCACCGCA
ATGCGTGCCA GCGCCTTCCC GACCGAAGAT CCACAGAAAC TTAAAACACC CGCTGATATC
ATGCCGCTCT ACCTTTGGCT GATGGGCGAT GACAGCCGCC GTAAAACCGG CATGACCTTT
GACGCCCAAC CGGGCCGTAA ACCAGGAATT TCCCAATGA
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| Protein sequence | MHYQPKQDLL NDRIILVTGA SNGIGREAAM TYARYGATVI LLGRNEEKLR QVASHINEET
GRQPQWFILD LLTCTSEDCQ QLAQRIAVNY PRLDGVLHNA GLLGDVCPMS EQNPQVWQDV
IQVNVNATFM LTQALLPLLL KSDAGSLVFT SSSVGRQGRA NWGAYAASKF ATEGMMQVLA
DEYQQRLRVN CINPGGTRTA MRASAFPTED PQKLKTPADI MPLYLWLMGD DSRRKTGMTF
DAQPGRKPGI SQ
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