Gene EcSMS35_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1852 
SymbolribA 
ID6146556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1873803 
End bp1874393 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content50% 
IMG OID641616728 
ProductGTP cyclohydrolase II 
Protein accessionYP_001743906 
Protein GI170683390 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000364314 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.76243e-21 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAGCTTA AACGTGTGGC AGAAGCCAAA CTGCCAACCC CATGGGGCGA TTTCCTGATG 
GTGGGATTTG AAGAACTGGC AACCGGACAC GATCATGTCG CGCTAGTCTA TGGCGATATT
TCCGGGCATA CCCCGGTACT TGCGCGCGTC CATTCCGAAT GTCTGACCGG TGACGCCCTG
TTCAGCTTGC GCTGCGATTG TGGCTTCCAG CTCGAAGCGG CACTGACGCA AATTGCCGAA
GAAGGCCGTG GTATTTTGCT GTATCACCGT CAGGAAGGTC GTAACATTGG TCTGCTGAAT
AAAATCCGCG CTTATGCACT GCAGGATCAA GGTTACGATA CTGTAGAGGC TAACCACCAG
TTAGGCTTCG CCGCTGATGA GCGCGACTTC ACTCTTTGCG CTGATATGTT CAAACTCCTT
GGCGTCAATG AAGTCCGCTT GTTAACCAAC AACCCGAAAA AAGTCGAAAT TCTGACCGAA
GCAGGGATTA ATATTGTTGA ACGCGTACCG TTGATTGTAG GTCGTAACCC CAATAACGAA
CATTATCTCG ATACCAAAGC CGAGAAAATG GGTCATTTGC TGAACAAATA A
 
Protein sequence
MQLKRVAEAK LPTPWGDFLM VGFEELATGH DHVALVYGDI SGHTPVLARV HSECLTGDAL 
FSLRCDCGFQ LEAALTQIAE EGRGILLYHR QEGRNIGLLN KIRAYALQDQ GYDTVEANHQ
LGFAADERDF TLCADMFKLL GVNEVRLLTN NPKKVEILTE AGINIVERVP LIVGRNPNNE
HYLDTKAEKM GHLLNK