| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1832 |
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| Symbol | sapF |
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| ID | 6143774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1853101 |
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| End bp | 1853907 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616708 |
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| Product | peptide transport system, ATP-binding protein SapF |
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| Protein accession | YP_001743886 |
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| Protein GI | 170680270 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.865298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0000646533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGAAA CGCTGCTTGA AGTGCGTAAT TTAAGTAAAA CGTTCCGCTA CCGGACCGGT
TGGTTTCGTC GTCAGACCGT AGAAGCGGTA AAACCCTTGA GCTTTACGCT ACGTGAAGGC
CAGACACTGG CGATTATTGG CGAGAATGGT TCGGGTAAAT CCACGCTGGC AAAAATGCTG
GCGGGAATGA TAGAACCTAC CAGCGGCGAG TTATTGATTG ACGATCATCC GCTGCATTTT
GGCGATTATT CCTTCCGCAG TCAGCGTATT CGCATGATTT TTCAGGATCC TTCGACCTCG
TTGAATCCCC GTCAACGTAT CTCGCAAATT CTGGATTTTC CACTGCGTCT GAACACCGAT
CTGGAACCGG AACAGCGTCG CAAACAGATT ATTGAAACGA TGCGTATGGT TGGGCTGCTA
CCGGATCACG TCAGTTACTA TCCGCATATG TTGGCACCCG GGCAAAAACA GCGTCTGGGT
CTGGCGCGCG CGCTGATATT GCGCCCAAAA GTCATTATTG CCGATGAAGC CCTCGCCTCA
CTGGATATGT CGATGCGTTC GCAGTTGATT AACCTGATGC TGGAGTTACA GGAAAAACAG
GGCATTTCGT ATATTTATGT TACCCAGCAT ATCGGAATGA TGAAGCACAT TAGCGACCAG
GTGCTGGTGA TGCATCAGGG CGAGGTTGTC GAGCGAGGCA GCACCGCAGA TGTGCTGGCA
TCGCCGCTGC ATGAACTCAC CAAACGGCTG ATCGCCGGTC ATTTTGGCGA GGCATTGACG
GCGGATGCGT GGCGTAAGGA CCGTTAG
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| Protein sequence | MIETLLEVRN LSKTFRYRTG WFRRQTVEAV KPLSFTLREG QTLAIIGENG SGKSTLAKML
AGMIEPTSGE LLIDDHPLHF GDYSFRSQRI RMIFQDPSTS LNPRQRISQI LDFPLRLNTD
LEPEQRRKQI IETMRMVGLL PDHVSYYPHM LAPGQKQRLG LARALILRPK VIIADEALAS
LDMSMRSQLI NLMLELQEKQ GISYIYVTQH IGMMKHISDQ VLVMHQGEVV ERGSTADVLA
SPLHELTKRL IAGHFGEALT ADAWRKDR
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