| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1793 |
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| Symbol | |
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| ID | 6144734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1812365 |
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| End bp | 1813264 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641616669 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001743847 |
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| Protein GI | 170681201 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTG AAGAAATCGC TGATCTGATG GCGTTTGTCG TTGTTGCAGA GGAGCGTAGC
TTCACTCGCG CAGCAGCCCG CCTGAGCATG GCGCAGTCAG CTTTAAGCCA GATAGTGCGC
CGTATAGAAG AACGATTGGG ATTGCGGCTT CTGACGCGAA CCACGCGCAG CGTTGTACCC
ACTGAAGCGG GCGAGCATCT TTTGTCTGTT CTTGGCCCTA TGTTGCATGA CATAGATTCT
GCCCTGACAT CCCTGAGCGA TCTGCAGAAC CGCCCATCCG GGACAATACG TATTACTACT
GTAGAACATG CAGCAAAAAC GATATTGTTA CCAGCTATGC GCACATTCCT GAAATCGCAT
CCTGAAATTG ATATTCAGCT TACCATTGAT TATGGTTTGA CCGATGTCGT TTCTGAACGT
TTTGATGCAG GCGTCCGTCT GGGTGGGGAG ATGGATAAAG ATATGATCGC CATTCGAATC
GGGCCAGACA TACCAATGGC TATTGTTGGC TCACCGGATT ATTTTTCTCG TCGAAGTGCT
CCAACGTCAG TGTCACAATT AATAGATCAT CAGGCAATTA ATTTGTATCT TCCCACATCG
GGTACAGCAA ATCGCTGGAG ATTAATACGC GGTGGACGTG AAGTTCGTGT TCGCATGGAA
GGTCAGCTTT TACTGAATAC GATAGACCTG ATCATTGATG CTGCAATTGA TGGGCATGGA
TTGGCGTATC TACCTTATGA TCAGGTTGAG CGGGCTATTA AAGAAAAAAA ACTGATACGT
GTTTTGGATA AATTCACACC AGATTTACCC GGTTATCACC TGTACTATCC ACACCGTCGA
CATGCTGGCT CGGCATTCTC ATTATTTATA GATAGGCTGA AGTATAAAGG TGCTGTTTAG
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| Protein sequence | MKREEIADLM AFVVVAEERS FTRAAARLSM AQSALSQIVR RIEERLGLRL LTRTTRSVVP
TEAGEHLLSV LGPMLHDIDS ALTSLSDLQN RPSGTIRITT VEHAAKTILL PAMRTFLKSH
PEIDIQLTID YGLTDVVSER FDAGVRLGGE MDKDMIAIRI GPDIPMAIVG SPDYFSRRSA
PTSVSQLIDH QAINLYLPTS GTANRWRLIR GGREVRVRME GQLLLNTIDL IIDAAIDGHG
LAYLPYDQVE RAIKEKKLIR VLDKFTPDLP GYHLYYPHRR HAGSAFSLFI DRLKYKGAV
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