Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1776 |
Symbol | ompN |
ID | 6147494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1792636 |
End bp | 1793754 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641616652 |
Product | outer membrane protein N |
Protein accession | YP_001743830 |
Protein GI | 170680275 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.728933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA AAGTTCTGGC ACTTTTAATT CCTGCCCTGC TCGCCGCAGG TGCTGCACAT GCAGCCGAAG TTTATAATAA AGACGGCAAC AAATTAGATC TGTATGGCAA AGTTGATGGC CTGCATTATT TTTCTGATAA TACCAATAGT GATGGTGATC AAACTTACGT GCGTTTTGGT TTTAAGGGTG AAACGCAAAT CACGGATCAA CTGGTTGGGT ATGGCCAGTG GGAATATAAC GTGCAGGCTA ATGGCTCTGA AGGTGATAAA GGTGATTCCT GGACTCGTCT TGCTTTTGCC GGTCTGAAAT TTGGTGACCT GGGTTCATTC GACTATGGTC GTAATTATGG CGTAATGTAC GACATCGAAG GCTGGACCGA TATGCTACCG GAATTCGGTG GTGACTCTTA TACCAAAGCC GATAACTATA TGACCGGTCG AGCCAATGGC GTAGCAACCT ATCGTAATAC TGATTTCTTC GGTCTGGTTG ATGGTCTGAA TTTTGCGTTA CAGTACCAGG GCGCGAATGA AAACCAGGTC ACCCATGAGC AAGAAGGTAC CGCAAACGGT GGTGATCGAA ACATTAAGAA CGCCAATGGC GACGGTTTTG GCATCTCCAC TACCTACGAC TTAGGTATGG GCATGAGTTT TGGTGCCGCC TATACCAGCT CCGATCGCAC TAACCAGCAG GCTGAATTCT CTACCGCAAA AGGCGATAAG GCTGACGCCT GGACTGCCGG GGCAAAATAC GATGCTAACA ATATCTACCT GGCGACCATG TATTCTGAAA CGCGTAACAT GACACCTTAC GGTGATTCAA CAAATACGAT TGCCAACAAA ACCCAGAACT TTGAAGTTAC TGCGCAGTAT CAGTTCGATT TTGGGCTGCG TCCGGCAGTC TCTTTCCTGA TGTCTAAAGG CAAGGATTTG GTCGGTACCG ACGGTGATAA AGATCTGGTT AAATACGCCG ATGTTGGCGC GACTTACTAT TTCAACAAAA ATATGTCCAC CTACGTTGAC TATAAAATCA ACCTGTTGGA TGAAGATGAC AGCTTCTACG CTGCCAACGG CATCTCTACC GATGATATTG TCGCTTTAGG TCTGGTTTAT CAGTTCTAA
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Protein sequence | MKSKVLALLI PALLAAGAAH AAEVYNKDGN KLDLYGKVDG LHYFSDNTNS DGDQTYVRFG FKGETQITDQ LVGYGQWEYN VQANGSEGDK GDSWTRLAFA GLKFGDLGSF DYGRNYGVMY DIEGWTDMLP EFGGDSYTKA DNYMTGRANG VATYRNTDFF GLVDGLNFAL QYQGANENQV THEQEGTANG GDRNIKNANG DGFGISTTYD LGMGMSFGAA YTSSDRTNQQ AEFSTAKGDK ADAWTAGAKY DANNIYLATM YSETRNMTPY GDSTNTIANK TQNFEVTAQY QFDFGLRPAV SFLMSKGKDL VGTDGDKDLV KYADVGATYY FNKNMSTYVD YKINLLDEDD SFYAANGIST DDIVALGLVY QF
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