Gene EcSMS35_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1725 
Symbol 
ID6146972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1732390 
End bp1732908 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content52% 
IMG OID641616601 
Productacetyltransferase 
Protein accessionYP_001743779 
Protein GI170680307 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00000562438 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCATCC GTTTTGCCCG CAAAGCCGAC TGTGCTGCCA TTGCGGAAAT TTATAACCAC 
GCCGTGTTGT ATACGGCGGC TATCTGGAAT GACCAAACGG TGGATGCAGA TAATCGCATT
GCCTGGTTTG AAGCGCGGAC TTTAGCTGGT TATCCGGTGC TGGTGAGTGA ACAAGATGGC
GTAGTGACGG GATATGCCTC GTTTGGCGAC TGGCGTAGTT TCGATGGTTT TCGCCATACC
GTGGAACATT CGATTTATGT CCATCCCGAT CATCAGGGCA AAGGTCTTGG GCGTAAATTG
TTAAGCCGAT TGATTGATGA AGCGAGGGAT TGCGGGAAGC ATGTCATGGT CGCCGGGATC
GAATCGCAAA ATCAGGCGTC TTTGCATCTG CACCAGTCGC TGGGATTTGT CGTCACCGCG
CAAATGCCGC AGGTGGGCAC TAAATTTGGG CGCTGGCTGG ATCTGACATT TATGCAGTTG
CAACTCGACG AACGCAGTGA ACCGGACGCG ATTGGATGA
 
Protein sequence
MSIRFARKAD CAAIAEIYNH AVLYTAAIWN DQTVDADNRI AWFEARTLAG YPVLVSEQDG 
VVTGYASFGD WRSFDGFRHT VEHSIYVHPD HQGKGLGRKL LSRLIDEARD CGKHVMVAGI
ESQNQASLHL HQSLGFVVTA QMPQVGTKFG RWLDLTFMQL QLDERSEPDA IG