Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1725 |
Symbol | |
ID | 6146972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1732390 |
End bp | 1732908 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616601 |
Product | acetyltransferase |
Protein accession | YP_001743779 |
Protein GI | 170680307 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000562438 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCATCC GTTTTGCCCG CAAAGCCGAC TGTGCTGCCA TTGCGGAAAT TTATAACCAC GCCGTGTTGT ATACGGCGGC TATCTGGAAT GACCAAACGG TGGATGCAGA TAATCGCATT GCCTGGTTTG AAGCGCGGAC TTTAGCTGGT TATCCGGTGC TGGTGAGTGA ACAAGATGGC GTAGTGACGG GATATGCCTC GTTTGGCGAC TGGCGTAGTT TCGATGGTTT TCGCCATACC GTGGAACATT CGATTTATGT CCATCCCGAT CATCAGGGCA AAGGTCTTGG GCGTAAATTG TTAAGCCGAT TGATTGATGA AGCGAGGGAT TGCGGGAAGC ATGTCATGGT CGCCGGGATC GAATCGCAAA ATCAGGCGTC TTTGCATCTG CACCAGTCGC TGGGATTTGT CGTCACCGCG CAAATGCCGC AGGTGGGCAC TAAATTTGGG CGCTGGCTGG ATCTGACATT TATGCAGTTG CAACTCGACG AACGCAGTGA ACCGGACGCG ATTGGATGA
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Protein sequence | MSIRFARKAD CAAIAEIYNH AVLYTAAIWN DQTVDADNRI AWFEARTLAG YPVLVSEQDG VVTGYASFGD WRSFDGFRHT VEHSIYVHPD HQGKGLGRKL LSRLIDEARD CGKHVMVAGI ESQNQASLHL HQSLGFVVTA QMPQVGTKFG RWLDLTFMQL QLDERSEPDA IG
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