| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1698 |
|---|
| Symbol | fdnI |
|---|
| ID | 6145125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1699801 |
|---|
| End bp | 1700454 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616574 |
|---|
| Product | formate dehydrogenase-N subunit gamma |
|---|
| Protein accession | YP_001743752 |
|---|
| Protein GI | 170682255 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGT CGAAAATGAT TGTGCGCACC AAGTTTATTG ATCGCGCCTG TCACTGGACC
GTGGTGATTT GCTTCTTCCT GGTGGCGCTG TCCGGGATTT CGTTCTTCTT CCCGACGCTG
CAATGGCTGA CGCAAACCTT CGGTACGCCG CAGATGGGAC GCATTTTGCA CCCGTTCTTC
GGCATTGCGA TTTTCGTCGC GCTGATGTTT ATGTTTGTGC GTTTTGTGCA TCACAACATC
CCGGATAAGA AAGATATTCC GTGGCTGTTG AACATTGTCG AAGTATTAAA AGGCAATGAG
CACAAAGTGG CGGATGTTGG TAAGTACAAC GCCGGGCAGA AGATGATGTT CTGGTCGATC
ATGAGCATGA TTTTCGTGCT GCTGGTGACC GGGGTGATTA TCTGGCGTCC GTACTTTGCG
CAGTACTTCC CGATGCAGGT TGTTCGCTAC AGCCTGCTGA TTCACGCGGC TGCGGGTATC
ATCCTGATCC ACGCCATCCT GATCCATATG TATATGGCAT TCTGGGTGAA AGGATCGATT
AAAGGGATGA TCGAAGGGAA GGTGAGCCGT CGCTGGGCGA AGAAACACCA TCCGCGCTGG
TATCGTGAAA TCGAGAAGGC AGAAGCGAAA AAAGAGAGTG AAGAAGGGAT ATAA
|
|---|
| Protein sequence | MSKSKMIVRT KFIDRACHWT VVICFFLVAL SGISFFFPTL QWLTQTFGTP QMGRILHPFF
GIAIFVALMF MFVRFVHHNI PDKKDIPWLL NIVEVLKGNE HKVADVGKYN AGQKMMFWSI
MSMIFVLLVT GVIIWRPYFA QYFPMQVVRY SLLIHAAAGI ILIHAILIHM YMAFWVKGSI
KGMIEGKVSR RWAKKHHPRW YREIEKAEAK KESEEGI
|
|---|
| |