Gene EcSMS35_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1628 
Symbol 
ID6145581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1618388 
End bp1618780 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content47% 
IMG OID641616504 
Producthypothetical protein 
Protein accessionYP_001743682 
Protein GI170681831 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000550334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC AGGCCATTGT ATTAGCAAGT TTTCTTGTCA TGCCTTATGC GTTGGCAGAT 
GACCAGGGCG GATTAAAACA GGATGCAGCG CCACCGCCGC CTCATGCAAT AGAAGATGGC
TATCGCGGAA CCGATGATGC AAAAAAAATG ACCGTTGATT TCGCAAAAAC CATGCATGAT
GGCGCTTCGG TTTCACTGCG CGGTAATTTG ATTTCTCACA AAGGAGAAGA CCGTTACGTT
TTTCGCGATA AGAGCGGTGA AATTAATGTT GTTATTCCTG CGGCAGTCTT TGATGGACGA
GAAGTTCAGC CGGACCAGAT GATCAACATT AGCGGAAGTC TGGATAAGAA AAGCGCTCCG
GCCGTCGTTC GGGTCACTCA TTTGCAGAAA TAA
 
Protein sequence
MKFQAIVLAS FLVMPYALAD DQGGLKQDAA PPPPHAIEDG YRGTDDAKKM TVDFAKTMHD 
GASVSLRGNL ISHKGEDRYV FRDKSGEINV VIPAAVFDGR EVQPDQMINI SGSLDKKSAP
AVVRVTHLQK