Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1625 |
Symbol | |
ID | 6144100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1614322 |
End bp | 1615008 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616501 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001743679 |
Protein GI | 170679935 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000899292 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG AAACGCAACT TAATCCCACA CAGCCTGTCA ATCAGCAGAT TTATCGTATT CTTCGTCGCG ACATTGTCCA TTGCCTGATT GCTCCAGGCA CACCGTTGTC GGAAAAAGAA GTTTCTGTTC GTTTCAATGT GTCACGCCAG CCGGTTCGTG AAGCCTTTAT TAAACTGGCG GAAAACGGCC TGATTCAAAT TCGTCCGCAG CGTGGCAGCT ACGTCAACAA AATTTCCATG GCCCAGGTGC GCAACGGCAG TTTTATCCGT CAGGCCATTG AGTGCGCGGT GGCGCGTCGG GCGGCGAGCA TGATTACCGA AAGCCAGTGC TACCAACTGG AACAAAATCT TCACCAGCAA CGCATTGCCA TTGAGCGCAA GCAACTGGAT GATTTTTTTG AACTTGATGA CAACTTCCAT CAACTCCTGA CCCAGATTGC CGACTGTCAA CTGGCGTGGG ATACCATTGA GAACCTGAAA GCGACCGTTG ATCGCGTGCG CTATATGAGT TTCGACCACG TTTCTCCACC AGAAATGCTG TTACGCCAGC ATCTTGAGAT TTTCTCTGCC CTGCAAAAAC GTGATGGCGA TGCGGTAGAA CGTGCAATGA CGCAACATTT GCAGGAAATC AGCGAATCCG TGCGCCAGAT CCGTCAGGAA AACAGCGACT GGTTTAGCGA AGAGTAA
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Protein sequence | MTVETQLNPT QPVNQQIYRI LRRDIVHCLI APGTPLSEKE VSVRFNVSRQ PVREAFIKLA ENGLIQIRPQ RGSYVNKISM AQVRNGSFIR QAIECAVARR AASMITESQC YQLEQNLHQQ RIAIERKQLD DFFELDDNFH QLLTQIADCQ LAWDTIENLK ATVDRVRYMS FDHVSPPEML LRQHLEIFSA LQKRDGDAVE RAMTQHLQEI SESVRQIRQE NSDWFSEE
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