| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1594 |
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| Symbol | arcD |
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| ID | 6143054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1581550 |
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| End bp | 1582932 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616471 |
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| Product | arginine/ornithine antiporter |
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| Protein accession | YP_001743649 |
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| Protein GI | 170680556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.132259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA AACTGGGACT GAGCGCACTC ACCGCGCTGG TATTAAGCTC AATGCTGGGC
GCGGGTGTTT TCAGTCTGCC GCAAAATATG GCGGCAGTTG CCAGCCCGGC AGCACTGCTC
ATCGGCTGGG GTATTACTGG CGCTGGCATT TTATTGCTGG CCTTTGCCAT GCTGATCCTC
ACGCGCATTC GTCCCGAACT TGACGGCGGT ATCTTTACCT ATGCCCGCGA AGGGTTTGGC
GAGCTAATCG GCTTTTGTTC CGCATGGGGA TACTGGCTGT GCGCAGTCAT CGCCAACGTC
TCCTATCTGG TGATCGTTTT TTCCGCGTTA AGCTTTTTTA CGGACACGCC GGAATTGCGC
CTGTTTGGCG ATGGTAATAC CTGGCAATCG ATAGTCGGTG CATCGGCTTT ATTGTGGATT
GTTCACTTTT TGATCCTGCG CGGGGTGCAA ACCGCTGCCA GCATTAACCT GGTGGCAACA
CTGGCAAAAC TGTTGCCGCT GGGTCTGTTT GTTGTGCTGG CGATGATGAT GTTCAAACTG
GATACCTTCA AGCTCGACTT CACCGGACTT GCACTTGGCG TACCCGTTTG GGAACAGGTG
AAAAACACCA TGCTGATCAC CCTGTGGGTT TTCATTGGTG TGGAAGGTGC CGTGGTTGTT
TCTGCGCGTG CGCGTAATAA ACGTGATGTT GGCAAAGCGA CACTGCTGGC GGTTCTCTCC
GCTCTGGGCG TTTACTTGCT GGTAACGCTG CTTTCGCTGG GTGTGGTGGC ACGTCCTGAA
CTGGCTGAAA TTCGTAACCC GTCAATGGCC GGTCTGATGG TGGAAATGAT GGGACCATGG
GGCGAAATCA TCATCGCAGC CGGTTTGATC GTTTCCGTTT GCGGCGCGTA CTTAAGCTGG
ACCATCATGG CGGCAGAAGT TCCGTTCCTG GCCGCCACTC ATAAAGCATT CCCGCGCATT
TTTGCGCGCC AGAACGCACA AGCTGCGCCA TCCGCCTCAC TGTGGTTGAC CAACATCTGC
GTGCAAATTT GTCTGGTGCT CATCTGGCTG ACCGGTTCCG ATTACAACAC ATTGCTGACC
ATCGCCTCAG AAATGATTCT GGTGCCCTAT TTCCTGGTCG GCGCGTTCTT GCTAAAAATC
GCAACCCGTC CACTGCATAA AGCGGTAGGT GTCGGTGCCT GCATTTATGG CTTATGGTTA
TTGTACGCCT CTGGTCCAAT GCACTTGCTG TTATCCGTTG TTCTGTATGC ACCGGGGCTG
CTGGTTTTCC TGTACGCGCG TAAAACGCAT ACCCATGATA ATGTACTGAA TCGTCAGGAA
ATGGTGCTGA TTGGCATGCT GTTAATTGCC TCAGTTCCGG CGACCTGGAT GCTGGTGGGA
TAA
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| Protein sequence | MEKKLGLSAL TALVLSSMLG AGVFSLPQNM AAVASPAALL IGWGITGAGI LLLAFAMLIL
TRIRPELDGG IFTYAREGFG ELIGFCSAWG YWLCAVIANV SYLVIVFSAL SFFTDTPELR
LFGDGNTWQS IVGASALLWI VHFLILRGVQ TAASINLVAT LAKLLPLGLF VVLAMMMFKL
DTFKLDFTGL ALGVPVWEQV KNTMLITLWV FIGVEGAVVV SARARNKRDV GKATLLAVLS
ALGVYLLVTL LSLGVVARPE LAEIRNPSMA GLMVEMMGPW GEIIIAAGLI VSVCGAYLSW
TIMAAEVPFL AATHKAFPRI FARQNAQAAP SASLWLTNIC VQICLVLIWL TGSDYNTLLT
IASEMILVPY FLVGAFLLKI ATRPLHKAVG VGACIYGLWL LYASGPMHLL LSVVLYAPGL
LVFLYARKTH THDNVLNRQE MVLIGMLLIA SVPATWMLVG
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