| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1571 |
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| Symbol | rnfB |
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| ID | 6146552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1555736 |
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| End bp | 1556314 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616448 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_001743626 |
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| Protein GI | 170682878 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.144341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTA TCTGGATTGC CGTTGCCGCC GTGAGCCTGC TGGGCCTGGC GTTTGGCGCC
ATTCTGGGTT ATGCCTCCCG CCGTTTTGCG GTGGAAGACG ATCCGGTCGT TGAGAAAATT
GACGAAATCT TACCGCAGAG CCAGTGTGGT CAGTGCGGTT ATCCCGGCTG TCGCCCCTAC
GCGGAAGCCA TCAGCTGTAA CGGTGAAAAA ATTAACCGCT GCGCCCCAGG TGGCGAAGCT
GTGATGCTAA AAATTGCTGA GTTGCTTAAT GTCGAGCCAC AGCCGCTGGA TGGCGAAGCG
CAAGAGCTAA CGCCTGCGCG GATGGTGGCG GTTATTGATG AAAATAACTG TATTGGCTGC
ACTAAATGTA TTCAGGCGTG TCCGGTAGAC GCCATCGTTG GCGCTACCCG CGCCATGCAT
ACGGTAATGA GTGATCTCTG TACGGGCTGC AATTTATGTG TTGATCCGTG CCCGACGCAC
TGCATCTCGT TGCAACCGGT TGCAGAAACA CCTGACTCCT GGAAATGGGA TCTGAACACC
ATTCCCGTGC GTATCATTCC CGTGGAACAC CATGCTTAA
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| Protein sequence | MNAIWIAVAA VSLLGLAFGA ILGYASRRFA VEDDPVVEKI DEILPQSQCG QCGYPGCRPY
AEAISCNGEK INRCAPGGEA VMLKIAELLN VEPQPLDGEA QELTPARMVA VIDENNCIGC
TKCIQACPVD AIVGATRAMH TVMSDLCTGC NLCVDPCPTH CISLQPVAET PDSWKWDLNT
IPVRIIPVEH HA
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