Gene EcSMS35_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1523 
Symbol 
ID6144106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1508388 
End bp1509014 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID641616401 
Producthypothetical protein 
Protein accessionYP_001743581 
Protein GI170680484 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00369582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000000711614 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCGG TTGATCGTCC ACTATTAGAT ATTGGCTTAA CGCGATTAGA ATTCTTGCGT 
ATATCAGGAA AAGGCCTTGC TGGTTTAACA ATTGCCCCTG CGTTACTGTC ACTTTTGGGT
TGCAAACAGG AAGATATTGA TAGCGGCACA GTAGGGTTGA TAAATACACC CAAAGGAGTG
CTGGTGACCC AACGTGCTCG ATGCACGGGT TGCCACCGCT GTGAAATCTC TTGTACCAAC
TTCAACGATG GCTCAGTAGG GACATTCTTC TCCCGTATCA AAATCCATCG CAATTATTTC
TTTGGCGATA ACGGGGTTGG CTCTGGTGGT GGCCTGTATG GCGATCTCAA CTATACCGCG
GACACCTGCC GTCAATGCAA AGAACCGCAA TGCATGAATG TCTGCCCGAT TGGTGCGATT
ACCTGGCAAC AGAAAGAAGG CTGTATTACC GTCGATCATA AACGTTGTAT TGGCTGTAGC
GCCTGTACGA CGGCGTGCCC GTGGATGATG GCCACCGTAA ATACCGAAAG TAAAAAATCC
TCGAAATGTG TGTTATGCGG TGAATGCGCA AACGCCTGCC CAACAGGGGC GTTAAAAATA
ATCGAGTGGA AAGATATTAC TGTGTGA
 
Protein sequence
MNPVDRPLLD IGLTRLEFLR ISGKGLAGLT IAPALLSLLG CKQEDIDSGT VGLINTPKGV 
LVTQRARCTG CHRCEISCTN FNDGSVGTFF SRIKIHRNYF FGDNGVGSGG GLYGDLNYTA
DTCRQCKEPQ CMNVCPIGAI TWQQKEGCIT VDHKRCIGCS ACTTACPWMM ATVNTESKKS
SKCVLCGECA NACPTGALKI IEWKDITV