Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1523 |
Symbol | |
ID | 6144106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1508388 |
End bp | 1509014 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641616401 |
Product | hypothetical protein |
Protein accession | YP_001743581 |
Protein GI | 170680484 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00369582 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000000711614 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCCGG TTGATCGTCC ACTATTAGAT ATTGGCTTAA CGCGATTAGA ATTCTTGCGT ATATCAGGAA AAGGCCTTGC TGGTTTAACA ATTGCCCCTG CGTTACTGTC ACTTTTGGGT TGCAAACAGG AAGATATTGA TAGCGGCACA GTAGGGTTGA TAAATACACC CAAAGGAGTG CTGGTGACCC AACGTGCTCG ATGCACGGGT TGCCACCGCT GTGAAATCTC TTGTACCAAC TTCAACGATG GCTCAGTAGG GACATTCTTC TCCCGTATCA AAATCCATCG CAATTATTTC TTTGGCGATA ACGGGGTTGG CTCTGGTGGT GGCCTGTATG GCGATCTCAA CTATACCGCG GACACCTGCC GTCAATGCAA AGAACCGCAA TGCATGAATG TCTGCCCGAT TGGTGCGATT ACCTGGCAAC AGAAAGAAGG CTGTATTACC GTCGATCATA AACGTTGTAT TGGCTGTAGC GCCTGTACGA CGGCGTGCCC GTGGATGATG GCCACCGTAA ATACCGAAAG TAAAAAATCC TCGAAATGTG TGTTATGCGG TGAATGCGCA AACGCCTGCC CAACAGGGGC GTTAAAAATA ATCGAGTGGA AAGATATTAC TGTGTGA
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Protein sequence | MNPVDRPLLD IGLTRLEFLR ISGKGLAGLT IAPALLSLLG CKQEDIDSGT VGLINTPKGV LVTQRARCTG CHRCEISCTN FNDGSVGTFF SRIKIHRNYF FGDNGVGSGG GLYGDLNYTA DTCRQCKEPQ CMNVCPIGAI TWQQKEGCIT VDHKRCIGCS ACTTACPWMM ATVNTESKKS SKCVLCGECA NACPTGALKI IEWKDITV
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