Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1514 |
Symbol | sufC |
ID | 6147471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1500352 |
End bp | 1501098 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616392 |
Product | cysteine desulfurase ATPase component |
Protein accession | YP_001743572 |
Protein GI | 170683761 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000113093 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAAGTA TTAAAGATTT ACACGTCAGC GTGGAAGATA AAGCTATCCT GCGTGGATTA AGCCTCGACG TTCGTCCCGG CGAAGTTCAC GCCATTATGG GGCCAAACGG TTCTGGCAAA AGTACCTTAT CGGCAACGCT TGCCGGGCGA GAAGATTATG AGGTGACGGG CGGCACGGTT GAGTTCAAAG GCAAAGATTT GCTTGCGCTG TCGCCGGAAG ATCGTGCAGG TGAAGGCATC TTTATGGCCT TCCAGTATCC GGTGGAAATT CCCGGCGTCA GTAACCAGTT TTTCCTGCAA ACGGCACTTA ATGCGGTGCG CAGCTATCGC GGCCAGGAAA CGCTCGACCG CTTTGATTTT CAGGATTTGA TGGAAGAGAA AATCGCTCTC CTGAAGATGC CGGAGGATTT ATTAACCCGT TCGGTAAACG TTGGTTTTTC CGGCGGCGAG AAAAAGCGCA ACGATATTTT GCAAATGGCG GTGCTGGAAC CGGAGTTATG CATTCTTGAT GAGTCGGACT CTGGGCTGGA TATTGACGCA TTAAAAGTGG TTGCCGATGG CGTGAACTCG CTGCGTGACG GCAAGCGTTC ATTCATCATT GTTACGCACT ACCAACGCAT TCTCGACTAC ATCAAGCCTG ATTACGTCCA TGTGCTGTAT CAGGGACGAA TTGTGAAATC CGGCGATTTC ACGTTGGTCA AACAACTGGA GGAGCAGGGT TATGGCTGGC TTACCGAACA GCAGTAA
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Protein sequence | MLSIKDLHVS VEDKAILRGL SLDVRPGEVH AIMGPNGSGK STLSATLAGR EDYEVTGGTV EFKGKDLLAL SPEDRAGEGI FMAFQYPVEI PGVSNQFFLQ TALNAVRSYR GQETLDRFDF QDLMEEKIAL LKMPEDLLTR SVNVGFSGGE KKRNDILQMA VLEPELCILD ESDSGLDIDA LKVVADGVNS LRDGKRSFII VTHYQRILDY IKPDYVHVLY QGRIVKSGDF TLVKQLEEQG YGWLTEQQ
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