| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1454 |
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| Symbol | chbC |
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| ID | 6145980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1437885 |
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| End bp | 1439243 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641616332 |
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| Product | PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC |
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| Protein accession | YP_001743512 |
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| Protein GI | 170681270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.262654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAATG TTATTGCATC GCTTGAAAAG GTACTCCTCC CTTTTGCAGT TAAAATAGGA
AAGCAGCCAC ACGTTAATGC AATCAAAAAT GGCTTTATTC GCTTAATGCC GTTAACCCTT
GCGGGGGCCA TGTTTGTATT AATTAACAAC GTTTTTCTAA GCTTTGGGGA GGGGTCGTTT
TTTTATTCCT TAGGTATTCG CCTGGATGCC TCAACCATTG AAACACTTAA TGGTCTGAAA
GGTATTGGCG GCAACGTATA TAACGGAACA TTAGGGATAA TGTCTTTAAT GGCACCGTTC
TTTATTGGCA TGGCGCTGGC AGAAGAGCGT AAAGTCGATG CGCTGGCGGC CGGGTTGTTA
TCCGTTGCAG CATTTATGAC CGTCACCCCA TATAGTGTCG GTGAGGCCTA TGCGGTTGGC
GCAAACTGGT TAGGTGGGGC GAATATCATC TCCGGGATTA TTATTGGCCT GGTGGTGGCA
GAAATGTTTA CCTTTATTGT CCGCCGCAAT TGGGTCATTA AATTGCCCGA TAGCGTACCT
GCTTCAGTAT CGCGTTCCTT CTCGGCTTTA ATTCCCGGCT TTATTATTCT TTCCGTGATG
GGGATTATTG CCTGGGCGTT GAATACCTGG GGCACCAACT TCCATCAGAT CATTATGGAT
ACCATCTCAA CCCCACTGGC ATCGTTGGGT AGTGTGGTGG GCTGGGCCTA TGTGATCTTT
GTTCCACTGC TCTGGTTCTT CGGTATTCAT GGTGCGCTGG CGCTGACCGC ACTGGACAAC
GGCATTATGA CGCCTTGGGC GCTGGAAAAT ATCGCGACCT ATCAGCAATA TGGTTCCGTC
GAAGCGGCGC TGGCAGCCGG TAAGACCTTC CATATCTGGG CCAAGCCGAT GCTGGACTCC
TTTATTTTCC TTGGGGGCAG TGGTGCGACT TTAGGTCTGA TCCTGGCTAT CTTTATCGCC
TCTCGCCGTG CTGATTATCG TCAGGTGGCA AAACTGGCGC TGCCGTCCGG CATCTTCCAG
ATTAACGAAC CGATTCTGTT TGGTCTGCCA ATTATCATGA ACCCGGTGAT GTTTATCCCG
TTTGTACTGG TACAACCGAT TCTGGCGGCA ATCACCCTCG CAGCGTACTA CATGGGCATT
ATTCCTCCGG TGACCAATAT TGCACCGTGG ACCATGCCAA CCGGTCTGGG AGCCTTCTTT
AACACCAACG GTAGCGTCGC CGCATTGCTG GTCGCACTCT TCAACCTTGG TATCGCAACG
TTAATTTATC TGCCCTTTGT TGTGGTCGCT AACAAAGCAC AAAACGCGAT TGATAAAGAA
GAGAGCGAAG AAGATATCGC TAACGCCCTG AAATTTTAA
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| Protein sequence | MSNVIASLEK VLLPFAVKIG KQPHVNAIKN GFIRLMPLTL AGAMFVLINN VFLSFGEGSF
FYSLGIRLDA STIETLNGLK GIGGNVYNGT LGIMSLMAPF FIGMALAEER KVDALAAGLL
SVAAFMTVTP YSVGEAYAVG ANWLGGANII SGIIIGLVVA EMFTFIVRRN WVIKLPDSVP
ASVSRSFSAL IPGFIILSVM GIIAWALNTW GTNFHQIIMD TISTPLASLG SVVGWAYVIF
VPLLWFFGIH GALALTALDN GIMTPWALEN IATYQQYGSV EAALAAGKTF HIWAKPMLDS
FIFLGGSGAT LGLILAIFIA SRRADYRQVA KLALPSGIFQ INEPILFGLP IIMNPVMFIP
FVLVQPILAA ITLAAYYMGI IPPVTNIAPW TMPTGLGAFF NTNGSVAALL VALFNLGIAT
LIYLPFVVVA NKAQNAIDKE ESEEDIANAL KF
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