| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1384 |
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| Symbol | rnd |
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| ID | 6144868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1372101 |
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| End bp | 1373228 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616262 |
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| Product | ribonuclease D |
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| Protein accession | YP_001743442 |
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| Protein GI | 170680016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0737977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.865883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTACC AAATGATTAC CACGGACGAT GCGCTGGCTT CTTTGTGTGA AGCCGTCCGT
GCCTTTCCGG CGATAGCCCT GGATACTGAA TTTGTTCGTA CGCGCACCTA TTACCCGCAG
CTAGGTCTAA TTCAACTTTT TGATGGTGAG CATCTGGCGC TAATTGATCC TCTCGGGATC
TCCGACTGGT CACCACTGAA AGCGATCCTG CGCGATCCGT CCATCACAAA ATTTCTCCAT
GCGGGCAGTG AAGATCTGGA AGTGTTCCTC AATGTCTTTG GCGAATTACC ACAACCCCTG
ATTGACACGC AAATCCTTGC TGCCTTCTGC GGACGCCCGA TGTCATGGGG TTTTGCTTCC
ATGGTGGAAG AGTATTCCGG CGTTACGCTG GACAAGAGTG AATCGCGCAC CGACTGGCTG
GCCAGACCGC TGACCGAACG TCAGTGTGAA TACGCAGCGG CGGATGTCTG GTATTTGTTA
CCGATCACCG CCAAGCTTAT GGTAGAAACG GAGGCCTCCG GCTGGCTACC TGCGGCGCTG
GATGAATGCC GCCTGATGCA AATGCGTCGT CAGGAAGTCG TTGCGCCGGA AGATGCCTGG
CGTGATATCA CCAATGCCTG GCAGTTACGC ACACGCCAAC TGGCCTGTCT GCAACTGTTA
GCCGATTGGC GACTGCGCAA GGCGCGGGAG CGCGATCTGG CAGTGAACTT TGTCGTGCGT
GAAGAGCATT TGTGGTCTGT AGCGCGTTAT ATGCCGGGAA GTTTAGGCGA ACTGGACAGC
CTGGGTTTAT CCGGTAGCGA AATCCGCTTT CACGGTAAAA CGCTGCTGGC GCTGGTGGAA
AAAGCGCAGA CATTGCCGGA AGAGGCCTTA CCGCAGCCGA TGCTTAACCT GATGGACATG
CCGGGTTATC GTAAAGCGTT TAAAGCGATT AAGTCGCTGA TTACTGACGT GAGCGAAACG
CACAAGATCA GCGCCGAATT GCTGGCATCG CGTCGGCAAA TCAACCAACT GCTGAACTGG
CACTGGAAAC TGAAACCGCA GAACAATTTG CCGGAGCTGA TTTCCGGCTG GCGTGGTGAG
CTGATGGCGG AAGCATTACA CAATTTATTG CAGGAATATC CGCAGTAA
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| Protein sequence | MNYQMITTDD ALASLCEAVR AFPAIALDTE FVRTRTYYPQ LGLIQLFDGE HLALIDPLGI
SDWSPLKAIL RDPSITKFLH AGSEDLEVFL NVFGELPQPL IDTQILAAFC GRPMSWGFAS
MVEEYSGVTL DKSESRTDWL ARPLTERQCE YAAADVWYLL PITAKLMVET EASGWLPAAL
DECRLMQMRR QEVVAPEDAW RDITNAWQLR TRQLACLQLL ADWRLRKARE RDLAVNFVVR
EEHLWSVARY MPGSLGELDS LGLSGSEIRF HGKTLLALVE KAQTLPEEAL PQPMLNLMDM
PGYRKAFKAI KSLITDVSET HKISAELLAS RRQINQLLNW HWKLKPQNNL PELISGWRGE
LMAEALHNLL QEYPQ
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