| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1371 |
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| Symbol | manX |
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| ID | 6143134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1357074 |
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| End bp | 1358045 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616249 |
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| Product | PTS system, mannose-specific IIAB component |
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| Protein accession | YP_001743429 |
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| Protein GI | 170680281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
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| TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000647863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0229749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT GCTTAAAACC
GCAGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGTGAA
AATGCCGAAA CGCTGATTGA AAAGTACAAC GCTCAGTTGG CAAAACTCGA CACCACTAAA
GGCGTGCTGT TTCTCGTTGA TACATGGGGA GGCAGCCCAT TCAATGCTGC CAGCCGCATT
GTCGTCGACA AAGAGCATTA TGAAGTCATT GCAGGCGTTA ACATTCCAAT GCTCGTGGAA
ACGTTAATGG CCCGTGATGA TGACCCAAGC TTTGATGAAC TGGTTGCGCT GGCAGTAGAA
ACAGGCCGTG AAGGCGTGAA AGCTCTGAAA GCCAAACCGG TTGAAAAAGC CGCGCCAGCA
CCCGCTGCCG CAGCACCAAA AGCGGCTCCA ACTCCGGCAA AACCAATGGG ACCAAACGAC
TACATGGTTA TTGGCCTTGC GCGTATCGAC GACCGTCTGA TTCACGGTCA GGTCGCCACC
CGCTGGACCA AAGAAACCAA TGTCTCCCGT ATTATTGTTG TTAGTGATGA AGTGGCTGCG
GATACCGTTC GTAAGACACT GCTCACCCAG GTTGCACCTC CGGGCGTAAC AGCACACGTA
GTTGATGTTG CCAAAATGAT TCGCGTCTAC AACAACCCGA AATATGCTGG CGAACGCGTA
ATGCTGTTAT TTACCAACCC AACAGATGTA GAGCGTCTCG TTGAAGGCGG CGTGAAAATC
ACCTCTGTTA ACGTCGGTGG TATGGCATTC CGTCAGGGTA AAACCCAGGT GAATAACGCG
GTTTCGGTTG ATGAAAAAGA TATCGAGGCG TTCAAGAAAC TGAATGCGCG CGGTATTGAG
CTGGAAGTCC GTAAGGTTTC CACCGATCCG AAACTGAAAA TGATGGATCT GATCAGCAAA
ATCGATAAGT AA
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| Protein sequence | MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTTK
GVLFLVDTWG GSPFNAASRI VVDKEHYEVI AGVNIPMLVE TLMARDDDPS FDELVALAVE
TGREGVKALK AKPVEKAAPA PAAAAPKAAP TPAKPMGPND YMVIGLARID DRLIHGQVAT
RWTKETNVSR IIVVSDEVAA DTVRKTLLTQ VAPPGVTAHV VDVAKMIRVY NNPKYAGERV
MLLFTNPTDV ERLVEGGVKI TSVNVGGMAF RQGKTQVNNA VSVDEKDIEA FKKLNARGIE
LEVRKVSTDP KLKMMDLISK IDK
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