Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1342 |
Symbol | exoX |
ID | 6147063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1333311 |
End bp | 1333973 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616221 |
Product | exodeoxyribonuclease X |
Protein accession | YP_001743401 |
Protein GI | 170681411 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.214775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCA TTATCGATAC AGAAACCTGC GGTTTGCAGG GAGGGATCGT TGAGATTGCC TCTGTTGATG TCATTGACGG AAAAATCGTC AACCCCATGA GCCACCTGGT GCGCCCCGAT CGTCCTATTA GTCCACAAGC GATGGCGATT CATCGCATCA CCGAAGCCAT GGTCGCCGAT AAACCGTGGA TTGAAGATGT GATCCCGCAC TATTACGGTA GTGAATGGTA TGTCGCGCAC AACGCCAGCT TTGACCGCCG CGTACTGCCT GAGATGCCCG GTGAGTGGAT TTGCACTATG AAACTGGCCC GTCGTTTGTG GCCAGGGATC AAGTATAGCA ATATGGCGTT ATATAAAACA CGGAAGCTCA ATGTACAGAC GCCGCCGGGC CTGCATCATC ACCGCGCGTT GTATGACTGT TATATCACCG CTGCGTTGCT TATCGATATT ATGAACACCT CCGGCTGGAC GGCAGAACAG ATGGCCGATA TCACCGGACG TCCGTCGTTG ATGACGACCT TCACCTTTGG CAAATACCGT GGCAAAGCGG TTTCCGACGT TGCCGAACGC GATCCGGGCT ATCTGCGCTG GTTGTTTAAT AACCTGGACA GCATGAGCCC GGAGCTGCGT TTAACACTGA AACATTATCT GGAAAATACT TAA
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Protein sequence | MLRIIDTETC GLQGGIVEIA SVDVIDGKIV NPMSHLVRPD RPISPQAMAI HRITEAMVAD KPWIEDVIPH YYGSEWYVAH NASFDRRVLP EMPGEWICTM KLARRLWPGI KYSNMALYKT RKLNVQTPPG LHHHRALYDC YITAALLIDI MNTSGWTAEQ MADITGRPSL MTTFTFGKYR GKAVSDVAER DPGYLRWLFN NLDSMSPELR LTLKHYLENT
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