Gene EcSMS35_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1337 
Symboleda 
ID6143342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1327349 
End bp1327990 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID641616215 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_001743395 
Protein GI170682566 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT GGAAAACAAG TGCAGAATCA ATCCTGACCA CCGGCCCGGT TGTACCGGTT 
ATCGTGGTAA AAAAACTGGA ACACGCGGTG CCGATGGCAA AAGCGTTGGT TGCTGGTGGG
GTGCGCGTTC TGGAAGTGAC TCTGCGTACC GAGTGCGCAG TTGACGCTAT CCGAGCTATC
GCCAAAGAAG TGCCTGAAGC GATTGTGGGT GCCGGTACGG TGCTGAATCC ACAGCAGCTG
GCAGAAGTCA CAGAAGCGGG TGCACAGTTT GCAATTAGCC CGGGTCTGAC CGAGCCGCTG
CTGAAAGCTG CTACCGAAGG GACTATTCCT CTGATTCCGG GGATCAGCAC TGTTTCCGAA
CTGATGCTGG GTATGGACTA CGGTTTGAAA GAGTTCAAAT TCTTCCCGGC TGAAGCTAAC
GGCGGTGTGA AAGCCCTGCA GGCGATCGCG GGTCCGTTCT CCCAGGTCCG TTTCTGCCCG
ACAGGTGGTA TTTCTCCGGC TAACTACCGT GACTACCTGG CGCTGAAAAG CGTGCTGTGC
ATCGGTGGTT CCTGGCTGGT TCCGGCAGAT GCGCTGGAAG CGGGCGATTA CGACCGCATT
ACTAAGCTGG CGCGTGAAGC TGTAGAAGGC GCTAAGCTGT AA
 
Protein sequence
MKNWKTSAES ILTTGPVVPV IVVKKLEHAV PMAKALVAGG VRVLEVTLRT ECAVDAIRAI 
AKEVPEAIVG AGTVLNPQQL AEVTEAGAQF AISPGLTEPL LKAATEGTIP LIPGISTVSE
LMLGMDYGLK EFKFFPAEAN GGVKALQAIA GPFSQVRFCP TGGISPANYR DYLALKSVLC
IGGSWLVPAD ALEAGDYDRI TKLAREAVEG AKL