| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1237 |
|---|
| Symbol | fliO |
|---|
| ID | 6146629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1237501 |
|---|
| End bp | 1237866 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641616115 |
|---|
| Product | flagellar biosynthesis protein FliO |
|---|
| Protein accession | YP_001743298 |
|---|
| Protein GI | 170682928 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3190] Flagellar biogenesis protein |
|---|
| TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0462666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACC ACGCTACTGT GCAATCTTCC GCGCCGGTTT CTGCTGCGCC ACTGCTGCAG
GTGAGCGGCG CACTCATCGC CATTATTGCC CTGATCCTCG CTGCTGCCTG GCTGGTAAAA
CGGTTGGGAT TTGCCCCTAA ACGCACTGGC GTTAACGGTC TGAAAATTAG CGCCAGTGCT
TCGCTGGGCG CGCGTGAACG GGTTGTGGTG GTCGATGTGG ATGATGCACG GCTGGTGCTC
GGCGTTACCG CAGGGCAAAT CAATCTGCTG CATAAACTTC CCCCTTCTGC ACCAACGGAA
GAGATACCGC AGACCGATTT TCAGTCGGTC ATGAAAAATT TGCTTAAGCG TAGCGGGAGA
TCCTGA
|
|---|
| Protein sequence | MNNHATVQSS APVSAAPLLQ VSGALIAIIA LILAAAWLVK RLGFAPKRTG VNGLKISASA
SLGARERVVV VDVDDARLVL GVTAGQINLL HKLPPSAPTE EIPQTDFQSV MKNLLKRSGR
S
|
|---|
| |