| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1234 |
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| Symbol | fliR |
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| ID | 6146807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1235691 |
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| End bp | 1236476 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641616112 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001743295 |
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| Protein GI | 170679575 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000114634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCAGG TGACAAGCGA TCAATGGCTT TCCTGGCTAA GTCTGTACTT CTGGCCGTTA
CTGCGCGTGC TGGCGCTCAT TTCTACCGCG CCAATTCTGA GCGAACGCAG CGTGCCGAAA
CGGGTAAAAC TGGGTCTGGC AATGATGATC ACGTTCGCTA TTGCCCCATC ATTACCTGCC
AACGATGTTC CTGTTTTTTC GTTCTTTGCT CTGTGGCTGG CCGTGCAGCA GATCCTGATC
GGCATTGCGC TTGGTTTTAC CATGCAATTT GCCTTTGCCG CTGTGCGAAC CGCTGGCGAA
ATTATCGGTC TGCAAATGGG GCTGTCATTT GCGACGTTTG TCGATCCGGC CAGCCATCTC
AATATGCCCG TTCTAGCCCG TATCATGGAT ATGCTGGCGT TATTGCTGTT CCTGACATTT
AACGGTCATT TATGGTTGAT TTCACTGCTG GTCGATACCT TTCACACCCT GCCAATTGGT
GGCGAACCGT TGAACAGCAA TGCGTTTCTG GCACTCACCA AAGCAGGGAG TTTGATTTTC
CTTAACGGGC TAATGCTGGC GTTACCGCTC ATTACTCTGC TGCTGACACT GAATCTGGCA
TTAGGTTTAC TTAATCGTAT GGCCCCGCAA TTATCCATTT TTGTTATTGG ATTTCCATTA
ACTCTGACTG TCGGTATCTC TTTAATGGCG GCATTAATGC CGTTAATTGC ACCTTTTTGC
GAACATTTAT TCAGTGAGAT GTTTAATTTG CTGGCTGATA TTATTAGTGA ATTGCCATTA
ATATAA
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| Protein sequence | MMQVTSDQWL SWLSLYFWPL LRVLALISTA PILSERSVPK RVKLGLAMMI TFAIAPSLPA
NDVPVFSFFA LWLAVQQILI GIALGFTMQF AFAAVRTAGE IIGLQMGLSF ATFVDPASHL
NMPVLARIMD MLALLLFLTF NGHLWLISLL VDTFHTLPIG GEPLNSNAFL ALTKAGSLIF
LNGLMLALPL ITLLLTLNLA LGLLNRMAPQ LSIFVIGFPL TLTVGISLMA ALMPLIAPFC
EHLFSEMFNL LADIISELPL I
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