| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1223 |
|---|
| Symbol | |
|---|
| ID | 6144560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1226291 |
|---|
| End bp | 1226986 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641616101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743284 |
|---|
| Protein GI | 170683271 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.239453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAC AACACTGGCA GGCACAGTTC GAAAACTGGT TGAAAAACCA TCATCAGCAC
CAGGACGCGG CCCATGACGT GTGTCATTTT CGCCGCGTCT GGGCTACGGC ACAGAAGCTG
GCGGCAGATG ACGATGTCGA TATGCTGGTG ATTTTAACCG CCTGTTATTT TCACGATATT
GTGAGCCTGG CGAAAAATCA TCCGCAAAGG CAGCGTTCTT CAATCCTGGC GGCAGAAGAG
ACGCGTCGCC TGCTCCGTGA AGAGTTCGAG CAATTTCCGG CGGAGAAAAT CGAGGCCGTT
TGTCATGCCA TTGCCGCTCA CAGTTTCAGC GCGCAAATCG CCCCCTTAAC AACGGAAGCT
AAAATCGTCC AGGATGCGGA TCGGCTGGAA GCCCTGGGGG CGATTGGCCT GGCGCGCGTG
TTTGCCGTTT CAGGGGCATT GGGCGTGGCG CTGTTTGATG GTGAAGATCC GTTCGCACAG
CATCGCCCGC TTGATGATAA ACGCTACGCG CTGGATCATT TCCAGACTAA GTTGCTGAAG
CTACCGCAAA CCATGCAAAC CGCAAGAGGC AAGCAGCTGG CGCAGCACAA CGCGCATTTT
TTAGTCGAGT TTATGGCGAA GCTCAGTGCC GAACTGGCGG GGGAGAATGA AGGTGTCGAT
CACAAGGTGA TAGATGCGTT TTCACCCGCG GGATAA
|
|---|
| Protein sequence | MDLQHWQAQF ENWLKNHHQH QDAAHDVCHF RRVWATAQKL AADDDVDMLV ILTACYFHDI
VSLAKNHPQR QRSSILAAEE TRRLLREEFE QFPAEKIEAV CHAIAAHSFS AQIAPLTTEA
KIVQDADRLE ALGAIGLARV FAVSGALGVA LFDGEDPFAQ HRPLDDKRYA LDHFQTKLLK
LPQTMQTARG KQLAQHNAHF LVEFMAKLSA ELAGENEGVD HKVIDAFSPA G
|
|---|
| |