Gene EcSMS35_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1212 
Symbol 
ID6142982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1217374 
End bp1218024 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content38% 
IMG OID641616090 
Producthypothetical protein 
Protein accessionYP_001743273 
Protein GI170680325 
COG category[R] General function prediction only 
COG ID[COG3443] Predicted periplasmic or secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0315082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.401918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGATTC GTCTTCACAA ACTGGCTGTT GCTTTAGGTG TCTTTATTGT TAGCGCTCCT 
GCCTTTTCGC ATGGTCATCA CTCACACGGC AAACCCTTAA CAGAGGTCGA ACAAAAAGCT
GCTAATGGTG TTTTTGATGA TGCCAATGTA CAAAACCGAA CGCTCAGTGA CTGGGATGGA
GTCTGGCAAT CCGTTTATCC TTTACTGCAA AGTGGCAAAC TTGACCCCGT CTTTCAGAAG
AAAGCGGATG CAGATAAAAC TAAAACATTT GCTGAAATTA AAGATTATTA TCACAAAGGT
TATGCAACAG ATATTGAGAT GATTGGCATT GAGGACGGCA TTGTTGAATT CCATAGAAAT
AATGAAACAA CATCCTGTAA ATATGAGTAC GATGGATACA AAATACTCAC CTATAAATCA
GGCAAGAAAG GCGTTCGTTA CTTATTCGAA TGTAAAGATC CTGAAAGCAA AGCCCCTAAA
TATATACAAT TTAGCGATCA TATAATTGCA CCACGAAAAT CATCTCATTT TCACATTTTT
ATGGGTAATG ATTCACAGCA ATCTTTATTA AATGAAATGG AAAACTGGCC AACGTATTAT
CCATATCAGT TGAGTAGCGA AGAAGTGGTC GAGGAAATGA TGTCTCATTG A
 
Protein sequence
MAIRLHKLAV ALGVFIVSAP AFSHGHHSHG KPLTEVEQKA ANGVFDDANV QNRTLSDWDG 
VWQSVYPLLQ SGKLDPVFQK KADADKTKTF AEIKDYYHKG YATDIEMIGI EDGIVEFHRN
NETTSCKYEY DGYKILTYKS GKKGVRYLFE CKDPESKAPK YIQFSDHIIA PRKSSHFHIF
MGNDSQQSLL NEMENWPTYY PYQLSSEEVV EEMMSH