Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1119 |
Symbol | |
ID | 6145098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1137015 |
End bp | 1137740 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641615999 |
Product | response regulator |
Protein accession | YP_001743191 |
Protein GI | 170681636 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.704841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATG TATTAATTGT TGATGACGAT ATATTAGTAG CTGATGTGAT TCGTCGCATT GTAGAACAAA CCCCGGCATT TAAATGCTGT GGCATAGCGT TATCACTTGG TCAGGCGAAA GAAATTATAT CTGTAAATAA AAAACTGGCT GACTTGATTT TGCTTGATCT TTATATCAAT AAAGATAACG GACTTGATTT ACTCCCTTTT CTTCATAGCA TTCATTGCAA AAGTGATGTT ATTGTAATTT CTGCTGCTGA TGACTCTGCG ACAATTAAAG ATTCATTACA TTATGGTGTT TCTGATTATC TGATAAAGCC ATTTCATATC TCACGTTTGG TTGATTCGCT TACACGATGG AAACATAAAA AGACTCTTCT TGAGAGTCAG AAGATATTCA ATCAATCAGA ACTGGATTTA TTAACTCACA AAATAATTCC GAACACAGAA AAAATAAGAC ATTTACCCAA AGGACTGTCA ACAGATACAT TGCGAATTAT TTGTAGGTGG ATTGATGAGC ATCAACATAA AAAATTCACA CTCAATGAAC TGGCCAGTGG TATTAAGATA TCCAGAATCT CATGCAGAAA ATATATCATC TGGCTGGTAA GTTGCCATAT ATTGGCATTT GATTTTTCCT GTGGTGTCAC TGGTCGCCCT GCTTATCGTT ACTGGATAAG ACATCAATAT TACCCATATA TTAAAAAATA TAGTGAAAAA CCGTAA
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Protein sequence | MNNVLIVDDD ILVADVIRRI VEQTPAFKCC GIALSLGQAK EIISVNKKLA DLILLDLYIN KDNGLDLLPF LHSIHCKSDV IVISAADDSA TIKDSLHYGV SDYLIKPFHI SRLVDSLTRW KHKKTLLESQ KIFNQSELDL LTHKIIPNTE KIRHLPKGLS TDTLRIICRW IDEHQHKKFT LNELASGIKI SRISCRKYII WLVSCHILAF DFSCGVTGRP AYRYWIRHQY YPYIKKYSEK P
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