Gene EcSMS35_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1111 
Symbol 
ID6146345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1125870 
End bp1126901 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content40% 
IMG OID641615992 
Productasparaginase family protein 
Protein accessionYP_001743184 
Protein GI170682695 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TAAAAGGTAT AACAGTAATG GCAGCCTTCG CATTGTGTAT AGGATATGCT 
CACGCTGAAT CTCAAACGCC AATACGCCTT GTAATTCATG GTGGAGCTGG CACCATAACA
AAAGATACTA TTACACCTGA ACAAGAAAAA CAATACAGAG AAAAGTTAAC AGATGCACTA
AATGCTGGGT ATGCTGTGCT TAATAGTGGA GGAAGTAGCC TTGATGCTGT TCAGCGTGCA
ATTAATGTTA TGGAGGACTC TCCCCTCTTC AATGCTGGAA AAGGCGCTGT CTTTACTCAT
GATGGCAAAA ACGAACTTGA TGCTGCAATT ATGGATGGAA AAACCAAAAT GGCCGGAGCC
GTTGCAGGAG TGACGACCAT AAAAAACCCT ATAAACGCTG CTTATGCAGT TATGACTAAA
AGCCCTCATG TATTAATGAT CTCTAATGGT GCGGAACTAT TTGCAAAAGA GCAAGGCTTA
GTTATGGTTG AGCCAGCATA TTTCAAAACT GATTTCCGTT GGCAACAGCT ACAGAACGCT
TTAAAAGACG AAAAAATAAC CCTTGATCAT AATGGTAAAT CAGCATCTCT TTTACTCCCC
CCAAAGAACT ACGACTATAA ATATGGAACT GTTGGAGCAG TCGCGTTGGA CAAAGATGGT
AATCTGGCAG CTGGAACATC AACAGGAGGT ATGACAAATA AACGTTACGG ACGCGTAGGT
GACTCGCCAA TAATTGGAGC AGGAACCTAT GCCGATAATA ATACCGTTGC TGTTTCTGCT
ACAGGTACTG GAGAAATGTT TATTAGAACT TCAACTGCAT ACAATATTGC TGCTCAGGTG
AAATATAAAA ATACACCATT GAAAGAAGCA GCTCAAAATG CGCTTGATGA AGTTAAAAAC
ATTAATGGTA GTGGTGGTGT CATTGTTCTA GATAAGAATG GTAATTATAC TATGAGTTTC
AATACAGAAG GGATGTATCG TGGAACTATC GGCAACGATG GTAAAGCTAT CGTATCAATT
TATGAACAAT AG
 
Protein sequence
MNKIKGITVM AAFALCIGYA HAESQTPIRL VIHGGAGTIT KDTITPEQEK QYREKLTDAL 
NAGYAVLNSG GSSLDAVQRA INVMEDSPLF NAGKGAVFTH DGKNELDAAI MDGKTKMAGA
VAGVTTIKNP INAAYAVMTK SPHVLMISNG AELFAKEQGL VMVEPAYFKT DFRWQQLQNA
LKDEKITLDH NGKSASLLLP PKNYDYKYGT VGAVALDKDG NLAAGTSTGG MTNKRYGRVG
DSPIIGAGTY ADNNTVAVSA TGTGEMFIRT STAYNIAAQV KYKNTPLKEA AQNALDEVKN
INGSGGVIVL DKNGNYTMSF NTEGMYRGTI GNDGKAIVSI YEQ