Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1096 |
Symbol | |
ID | 6145175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1111758 |
End bp | 1112375 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641615980 |
Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
Protein accession | YP_001743172 |
Protein GI | 170681749 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTGGC AAACTAAACT CCCGCTGATC GCCATTTTGC GCGGCATTAC GCCCGACGAG GCGCTGGTGC ATGTTGGCGC GGTGATTGAC GCCGGGTTCG ACGCAGTTGA AATCCCGCTG AATTCCCCAC AATGGGAGCA GAGCATTCCC GCCATCGTTG ATGCGTATGG CGACAAGGCG TTGATTGGCG CAGGTACGGT ACTGAAACCT GAACAGGTCG ATGTGCTCGC CAGGATGGGC TGCCAGCTCA TCGTTACGCC CAATATCCAT AGTGAAGTGA TCCGCCGTGC GGTGGGCTAC GGCATGACCG TTTGCCCCGG CTGCGCGACG GCGACCGAAG CCTTTACCGC GCTCGACGCG GGCGCTCAGG CGCTGAAAAT ATTTCCGTCA TCGGCTTTTG GTCCGCAATA CATCAAAGCG TTAAAAGCGG TATTACCACC GGACATCGCA GTCTTTGCCG TTGGCGGCGT GACGCCAGAA AACCTGGCGC AGTGGATAGA CGCAGGTTGT GCAGGGGCAG GCTTAGGCAG CGATCTCTAT CGCGCCGGGC AGTCCGTAGA ACGCACCGCG CAGCAGGCAG CAGCATTTGT TAAGGCGTAT CGAGAGGCAG TGCAATGA
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Protein sequence | MQWQTKLPLI AILRGITPDE ALVHVGAVID AGFDAVEIPL NSPQWEQSIP AIVDAYGDKA LIGAGTVLKP EQVDVLARMG CQLIVTPNIH SEVIRRAVGY GMTVCPGCAT ATEAFTALDA GAQALKIFPS SAFGPQYIKA LKAVLPPDIA VFAVGGVTPE NLAQWIDAGC AGAGLGSDLY RAGQSVERTA QQAAAFVKAY REAVQ
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