Gene EcSMS35_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1096 
Symbol 
ID6145175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1111758 
End bp1112375 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID641615980 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_001743172 
Protein GI170681749 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGGC AAACTAAACT CCCGCTGATC GCCATTTTGC GCGGCATTAC GCCCGACGAG 
GCGCTGGTGC ATGTTGGCGC GGTGATTGAC GCCGGGTTCG ACGCAGTTGA AATCCCGCTG
AATTCCCCAC AATGGGAGCA GAGCATTCCC GCCATCGTTG ATGCGTATGG CGACAAGGCG
TTGATTGGCG CAGGTACGGT ACTGAAACCT GAACAGGTCG ATGTGCTCGC CAGGATGGGC
TGCCAGCTCA TCGTTACGCC CAATATCCAT AGTGAAGTGA TCCGCCGTGC GGTGGGCTAC
GGCATGACCG TTTGCCCCGG CTGCGCGACG GCGACCGAAG CCTTTACCGC GCTCGACGCG
GGCGCTCAGG CGCTGAAAAT ATTTCCGTCA TCGGCTTTTG GTCCGCAATA CATCAAAGCG
TTAAAAGCGG TATTACCACC GGACATCGCA GTCTTTGCCG TTGGCGGCGT GACGCCAGAA
AACCTGGCGC AGTGGATAGA CGCAGGTTGT GCAGGGGCAG GCTTAGGCAG CGATCTCTAT
CGCGCCGGGC AGTCCGTAGA ACGCACCGCG CAGCAGGCAG CAGCATTTGT TAAGGCGTAT
CGAGAGGCAG TGCAATGA
 
Protein sequence
MQWQTKLPLI AILRGITPDE ALVHVGAVID AGFDAVEIPL NSPQWEQSIP AIVDAYGDKA 
LIGAGTVLKP EQVDVLARMG CQLIVTPNIH SEVIRRAVGY GMTVCPGCAT ATEAFTALDA
GAQALKIFPS SAFGPQYIKA LKAVLPPDIA VFAVGGVTPE NLAQWIDAGC AGAGLGSDLY
RAGQSVERTA QQAAAFVKAY REAVQ